Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00070 ATGGTGAAGTCGTCGCGCTGCGAGAAGGCAACCTTAAAGAAAGGGCCATGGACTCCTGAGGAAGACCAGAAGCTCATGGCTTACATTCAACAACATGGCCATGGAAATTGGTCTTTCTTGCCTGCAAAAGCTGGACTCCGAAGATGTGGGAAGAGCTGCAGACTGAGATGGACTAATTACCTAAGACCTGACATCAAACGAGGCAACTTCAGCTCGCAAGAAGACCAAACCATTATTCAACTTCATGCTCTTCTGGGAAACAGATGGTCGGCTATAGCACTTCATTTGCCAAAAAGAACAGACAATGAGATCAAGAACCACTGGAACACCCACCTCAAGAAGAGGCTCACCAGAATGGGAATAGACCCCGCCACTCACAAACCCATAAACGACGCCTTACACGGCCAGTCCATGGACGCAGCCAACCTCAACCATATGGCTCAGTGGGAGACTGCCCGGCTCCAAGCCGAATCCAGACTGGTCAGCGAATCCAAGCTTCGGCTCCAGATCAACCGGCTTATCGGCTCCTTCTCTTCCCAACCTTGGCCCACTCGACTCTTGCTCAACAAGATCACACCTCTGCCGTCACCAACTCCCTGCCTCGACGTCCTAAAGGCATGGCAGAATTCATGGTCGCCGACGTCGCAATCTTCAACTCCGACAACTACTGCTGATAACATCCCCAAAACGCACAGCATGTATGCCATGATGCTCGCCACCGAGGCCGACCTAAAGCCGCCGACGTCGACTTTAAGCTTCGCAGACACAATTTTCCTCAACTCCAACACTAGTAATATAACCAACTTTGGACTTATCAATCAAAGCTTATTACTTCCGTCTTCCAACGCCGGTGGGGACAGTGGAATAATCATGAAAGAAGCGAGTGATGGTGCGTCATATTGGGAAAACTCAGCGGGAAGCTTGATGAGAGACGACGACATTATGGTGGCCGTGGAAGGATTCAGATCAAAAGGTTATAACTGTGATGATTCCATGGTAGACCTGCACAATGACGGTGTGTTGGTGTATGGATTCAATGAGATCTCACCACAACAAAACCTGGGAGTCTTAAACGTCGGAGAAGAAGGAAGCACCAACTTTGAGGAGAAGCATTATTGGGAAACCATACTCAACTTGGGGAATGATTTTCCCTGA 1155 0.4926 MVKSSRCEKATLKKGPWTPEEDQKLMAYIQQHGHGNWSFLPAKAGLRRCGKSCRLRWTNYLRPDIKRGNFSSQEDQTIIQLHALLGNRWSAIALHLPKRTDNEIKNHWNTHLKKRLTRMGIDPATHKPINDALHGQSMDAANLNHMAQWETARLQAESRLVSESKLRLQINRLIGSFSSQPWPTRLLLNKITPLPSPTPCLDVLKAWQNSWSPTSQSSTPTTTADNIPKTHSMYAMMLATEADLKPPTSTLSFADTIFLNSNTSNITNFGLINQSLLLPSSNAGGDSGIIMKEASDGASYWENSAGSLMRDDDIMVAVEGFRSKGYNCDDSMVDLHNDGVLVYGFNEISPQQNLGVLNVGEEGSTNFEEKHYWETILNLGNDFP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00070 384 Gene3D - 13 66 - -
Pral4667g00070 384 CDD SANT 69 112 IPR001005 -
Pral4667g00070 384 CDD SANT 16 61 IPR001005 -
Pral4667g00070 384 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 256 - -
Pral4667g00070 384 FunFam Transcription factor RAX3 7 67 - -
Pral4667g00070 384 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pral4667g00070 384 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4667g00070 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral4667g00070 384 Gene3D - 69 116 - -
Pral4667g00070 384 FunFam MYB transcription factor 68 129 - -
Pral4667g00070 384 SMART sant 13 63 IPR001005 -
Pral4667g00070 384 SMART sant 66 114 IPR001005 -
Pral4667g00070 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral4667g00070 384 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4667g00070 384 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral4667g00070 384 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00070 Pral-Chr4667 404529 406021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00070 1 166 MYB Transcription Factor Family AT3G01140 76.331 1.32e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4667g00070 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00070 K09422 - gmx:100799222 372.859