Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00053 ATGCCCTACAGCTACGAACAAGAAGACAGAGAAGAAGCTTTAGAGGGAAAAACACGGGAAAGAAAGTGCTTCACAGTTCACATTCTCAGGAACCAACCGATTAACCGTAATAACGATCGTGCTCAGAAATCACACCCGTCAGCACGCGCAAAATCGGAAGGAGAAGCTCCTGCAGGGGATTCATCTGATCCGTTTAGTGAGGACATGAGCGACAACACGTCCCCCCGCGGCGGTTCTTCCAGCGGCTCTTCATCGGCGGAGGGCAGGGACAAGAAGAGGGAGAAGGCTAAAGTTAGTCGCACTTCAATGATACTATGGCATTCGCACCAAAACGATGCCACCGCTGTTCGGAAGCTCCTGGAGGAAGATCCGTCGCTTGTGATGGCCAGAGATTACGATAGTCGAACTCCACTTCATGTGGCTTCCCTCCATGGTTGGATTGACGTTGCTAAGTGCTTGATTGAATTTGGTGCCGATGTTAACTCTCAGGATCGTTGGAGAAACACTCCTCTAGCTGATGCAGAAGGAGCTAAAAAGTATAGCATGATGGAGCTTTTAAAATCATATGGAGGCTTGTCTTATGGCCAAAGTGGAAGCCACTCTGAACAGAAGCCCGTTGCACCCCCATTGTCTAACAAGTGTGATTGGGAAGTCGACCCTACTGAGCTGGACTTCTCACATTCAGCTCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACACCAGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATAAATTAGTGGTCCAGGACTTCAGGCATGAGGTTAATTTGTTAGTGAAGCTTCGACACCCAAACGTAGTCCAGTTTCTTGGAGCTGTTACCGAGAAGAAACCTCTTATGTTAATCACTGAATATCTTAGAGGGGGCGATCTTCATCAGCATCTTAAGGAAAAAGGTTCAATTAGTCCATCGACAGCTGTCAACTTTGCGTTAGATATTGCCAGAGGGATGGCCTATCTTCACAACGAACCAAATGTTATAATTCATCGGGACCTTAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCAGAGCATTTAAAAGTCGGAGATTTTGGACTGAGCAAGCTTATCAAGGTCCAGAATTCTCATGACGTTTACAAGATGACTGGTGAAACAGGAAGCTACCGGTATATGGCTCCTGAAGTATTCAAACACAAGAAATACGATAAGAAGGTTGATGTCTTCTCCTTTGCAATGATACTATACGAGATGCTGGAAGGGGAACCACCTTTTGCCAATTGTGAGCCTTATGACGGAGCCAAACATGTAGCAGAAGGACGCAGGCCAACTATGCGAGCAAAGGGTTATATCCCTGAATTGCGAGAGTTAACAGAACAGTGCTGGGCAGCTGATTACCATCAAAGACCTTCCTTCTTGGAGATCCTTAAACGACTTGAGAAGATCAAAGAAAACAATCTACCTTCGGAATATCCCTGGAAATTGTTCTCTTCCTAA 1509 0.4566 MPYSYEQEDREEALEGKTRERKCFTVHILRNQPINRNNDRAQKSHPSARAKSEGEAPAGDSSDPFSEDMSDNTSPRGGSSSGSSSAEGRDKKREKAKVSRTSMILWHSHQNDATAVRKLLEEDPSLVMARDYDSRTPLHVASLHGWIDVAKCLIEFGADVNSQDRWRNTPLADAEGAKKYSMMELLKSYGGLSYGQSGSHSEQKPVAPPLSNKCDWEVDPTELDFSHSARIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVVQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQHLKEKGSISPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSAEHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHKKYDKKVDVFSFAMILYEMLEGEPPFANCEPYDGAKHVAEGRRPTMRAKGYIPELRELTEQCWAADYHQRPSFLEILKRLEKIKENNLPSEYPWKLFSS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00053 502 ProSitePatterns Protein kinases ATP-binding region signature. 231 252 IPR017441 GO:0005524
Pral4667g00053 502 Pfam Protein tyrosine and serine/threonine kinase 228 483 IPR001245 GO:0004672|GO:0006468
Pral4667g00053 502 SMART serkin_6 225 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4667g00053 502 FunFam Integrin-linked protein kinase family 304 499 - -
Pral4667g00053 502 Pfam Ankyrin repeats (many copies) 119 171 IPR002110 GO:0005515
Pral4667g00053 502 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 77 488 - -
Pral4667g00053 502 ProSiteProfiles Ankyrin repeat region circular profile. 133 165 - -
Pral4667g00053 502 ProSiteProfiles Protein kinase domain profile. 225 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4667g00053 502 MobiDBLite consensus disorder prediction 1 26 - -
Pral4667g00053 502 MobiDBLite consensus disorder prediction 65 85 - -
Pral4667g00053 502 Gene3D - 66 197 IPR036770 -
Pral4667g00053 502 ProSiteProfiles Ankyrin repeat profile. 133 165 IPR002110 GO:0005515
Pral4667g00053 502 MobiDBLite consensus disorder prediction 86 100 - -
Pral4667g00053 502 CDD STKc_MAP3K-like 231 483 - -
Pral4667g00053 502 MobiDBLite consensus disorder prediction 1 102 - -
Pral4667g00053 502 SUPERFAMILY Ankyrin repeat 102 190 IPR036770 -
Pral4667g00053 502 FunFam serine/threonine-protein kinase STY46-like 218 304 - -
Pral4667g00053 502 SUPERFAMILY Protein kinase-like (PK-like) 223 494 IPR011009 -
Pral4667g00053 502 PIRSF ILK 36 502 - -
Pral4667g00053 502 Gene3D Transferase(Phosphotransferase) domain 1 305 497 - -
Pral4667g00053 502 Gene3D Phosphorylase Kinase; domain 1 217 304 - -
Pral4667g00053 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
Pral4667g00053 502 SMART ANK_2a 133 162 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00053 Pral-Chr4667 306943 312994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00053 74 502 MAP Kinase Kinase Kinase AT1G14000 79.587 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pral4667g00053 PK_Tyr_Ser-Thr 5.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00053 - - qsa:O6P43_025503 733.791