Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00051 ATGGAAGAGACAGAGGAGTCCAATGGCAAGAAGAAATCCACAGCTCAAAGAAGAAGGAGCTTGAGGGTAGGAGCGAACTCTGATGAGCATTATTATCAGAATAATCAGTTTGGTGGGCTGTGTAACCAGAATAAGTATCAGAGGTACTGTCCGGCTCTTCTCTCTGCCTTCTATTTGCCTCTGCAACTAGCTCTGGCGCCACCGTTCCCTCAAAACCAAGCCATCAAATCCCAAACCCATTTCAAGAAATATCCATGCAAACTCAATAACAATTCTCCCTTGGCTGCCTCCTCAGACAACAAGAAGGTCTCAGAAGAACCCACTGTTTCTCCCGCTCGGGTGGGGCTTCAACTTCAAGCTAAAGCGAAGACATCGCTTAAAGGGGATGAAGGGAAGAAATTTATTCCTGCGAGAAAACCACAGACATTGATTGCTGCAAAAAGACCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCTCTCTTCTCGCCAACCACTTCCTCGTGCAATTCGATTCATCACAAAAAATATACCATTACAACGTTGAAATCACTCCTAATGCCTCCAAGGAAGTTGCCAGAGAAATCAAACAGAAATTGATTAACAACAATTCTGTGGGTTTTTCTGGTGCTGTGCCTGCATATGATGGGAGGAAGAATCTCTACAGCTCCGTGGAATTCCAAAATGATAAGCTTGAGTTCTACATAAGCCTTCCAATCCACTCTAGCAAATCGGCATTGCCTTATGAAGAAATCCATGACTTGAAAGAGAAGAAAGAACAGCTTAAACTGTTTAGGATAAATATCAAATTAGTTTCTAAGATCAACGGGATGGAGTTGAGTAACTACTTGAGCAAAGAGGGAGATGATTGGGTTCCACTTCCACAGGACTATCTTCATGCTTTGGATGTAGTTTTGAGGGAGAGCCCGACTGAGAAGTGTGTACCTGTTGGTAGATCATTTTATTCCAGTTCAATGGGAAAAAGCAGAGAGATTGGAGGAGGAGCTGTTGGATTCAGAGGGTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTAGCCCTCAATGTAGATTTCTCTGTGACTGCTTTCCATGAGAGCATAGGAGTTATTCCATACCTGCAGAAGCGTCTGGAGTTTCTTCGAGATCTTTCTCAAAGGAAGACAACGAGTTTAACTGGTGAAGAAAGGAAGGAAGTGGAGAAGGCATTGAAGAATATCAGGGTCTTTGTTTGCCACAGAGAAACTGTACAGAGATACCGAGTCTGTGGCTTAACTGAAGAAGCTACAGAAAATCTTTGGTTTGCTGACAGGGATGGAAAGAATTTACGACTTGTGAGTTACTTTAAAGATCACTATAACTATGACATTCAATTCAGAAAATTGCCGTGCCTGCAAATTAGTAGGAGTAAACCATGTTATCTACCTATGGAGCTTTGTGTGATCTGTGAAGGTCAGAAATTTCTTGGCAAGCTGTCTGATGATCAAACAGCAAAGATACTGAAGATGGGCTGCCAAAGACCACGAGAACGGAAAGCCATCATCGAAGGAGTCATGAGAGGGAATGTAGGGCCTACCAGTGGCAACCAGGAAGGAGAATTTAAACTCAAAGTGTCTCGCGAAATGACAAGGCTGACTGGGAGAATTCTTCACCCTCCCAAGCTAAAGCTAGGAGATGGAGGTCGAGTTAGAAATCTATTTCCTTCACGTCATGACCGCCAGTGGAACCTTCTTGATGGCCATGTCTTTGAAGGAACTAAAATTGAAAGGTGGGCACTAATAAGTTTTGGTGGCACACCTGAGCAGAAGTCTAATATCCCTAGATTCATAAACCAGCTATCTCAAAGGTGTGAACAATTGGGAATTTTCCTTAACAAGAATACAATCATTAGTCCTCAGTTTGGCAGCCAGGTGCTTAACAATGTTAACGTTTTGGAATCTAAGCTCAAGAAAATCCAGAGAGCTGCCTCAAACAATCTCCAGCTGCTTATTTGCATAATGGAGAAAAAACACAAAGGGTACGCAGACCTGAAACGAATTGCTGAGACTAGTGTTGGGGTTGTAAGCCAATGCTGCTTGTATCCAAATCTCATCAAGCTAAGTTCACAGTTTTTGGCTAATTTGGCCTTAAAAATTAATGCCAAGGTTGGTGGATGCACAGTTGCTCTTTACAATTCACTTCCTTCTCAAATCCCAAGACTATTTCAGTTTGATGAGCCAGCCATTTTTATGGGCGCTGATGTAACACATCCTCATCCACTTGACGATTTCAATCCATCTATTGCTGCTGTTGTTGGCAGCATGAATTGGCCAACAGCAAACAAATACATTTCAAGAATAAGGTCCCAAACACACAGACAGGAGATCATCCAGGATCTTGGTGCAATGGTGGGTGAACTGCTTGATGATTTTTATCAGGAAGTAAAGAAACTTCCCGGGAGAATAATTTTCTTCAGAGATGGGGTTAGTGAAACACAGTTTTATAAAGTACTGGAAGAGGAATTGCAATCCATCAGAGGGGCGTGTTCCAAATTTCCTGATTATAAACCATTCATTACTTTCGCAGTAGTACAGAAGAGGCACCATACAAGGTTGTTTCCCGTTGAAACAGACCAATCCACCAACCAAAACCATTTTTCATATGAGAATATTCCGCCAGGGACTGTGGTTGATTCTGTGATCACTCACCCGAAAGAATTTGATTTCTATCTATGCAGCCACTGGGGTGTGAAAGGAACAAGCAGGCCAACACATTACCATGTTCTGTGGGATGAAAACCAGTTCACTTCTGATGAATTACAGAAGCTGGTTTACAATTTATGTTACACTTTTGTGAGGTGCACCAAGCCAATTTCTTTGGTCCCACCTGCTTATTATGCACATTTGGCAGCTTACAGAGGCAGACTCTACCTAGAGAGATCAGAGTCTTCAGGTTTATACAGTTCATTATCAAGAGCAGCCCCTCCAAAGACAGCACCTCTACCAAGACTCAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAA 3024 0.4259 MEETEESNGKKKSTAQRRRSLRVGANSDEHYYQNNQFGGLCNQNKYQRYCPALLXSAFYLPLQLALAPPFPQNQAIKSQTHFKKYPCKLNNNSPLAASSDNKKVSEEPTVSPARVGLQLQAKAKTSLKGDEGKKFIPARKPQTLIAAKRPDSGGKEGSVISLLANHFLVQFDSSQKIYHYNVEITPNASKEVAREIKQKLINNNSVGFSGAVPAYDGRKNLYSSVEFQNDKLEFYISLPIHSSKSALPYEEIHDLKEKKEQLKLFRINIKLVSKINGMELSNYLSKEGDDWVPLPQDYLHALDVVLRESPTEKCVPVGRSFYSSSMGKSREIGGGAVGFRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTSLTGEERKEVEKALKNIRVFVCHRETVQRYRVCGLTEEATENLWFADRDGKNLRLVSYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGNVGPTSGNQEGEFKLKVSREMTRLTGRILHPPKLKLGDGGRVRNLFPSRHDRQWNLLDGHVFEGTKIERWALISFGGTPEQKSNIPRFINQLSQRCEQLGIFLNKNTIISPQFEXSQVLNNVNVLESKLKKIQRAASNNLQLLICIMEKKHKGYADLKRIAETSVGVVSQCCLYPNLIKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQFDEPAIFMGADVTHPHPLDDFNPSIAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLEEELQSIRGACSKFPDYKPFITFAVVQKRHHTRLFPVETDQSTNQNHFSYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESSGLYSSLSRAAPPKTAPLPRLSENIKKLMFYC 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00051 1009 Gene3D paz domain 361 488 - -
Pral4667g00051 1009 SMART Piwi_a_2 663 973 IPR003165 GO:0003676
Pral4667g00051 1009 FunFam Protein argonaute 7 362 488 - -
Pral4667g00051 1009 MobiDBLite consensus disorder prediction 1 27 - -
Pral4667g00051 1009 CDD Piwi_ago-like 533 972 IPR045246 -
Pral4667g00051 1009 SUPERFAMILY PAZ domain 362 520 IPR036085 GO:0005515
Pral4667g00051 1009 SUPERFAMILY Ribonuclease H-like 648 973 IPR012337 -
Pral4667g00051 1009 SMART PAZ_2_a_3 375 515 IPR003100 GO:0005515
Pral4667g00051 1009 Pfam N-terminal domain of argonaute 160 306 IPR032474 -
Pral4667g00051 1009 Pfam Argonaute linker 1 domain 316 365 IPR014811 -
Pral4667g00051 1009 ProSiteProfiles Piwi domain profile. 663 973 IPR003165 GO:0003676
Pral4667g00051 1009 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 141 974 - -
Pral4667g00051 1009 Gene3D - 549 725 - -
Pral4667g00051 1009 ProSiteProfiles PAZ domain profile. 375 484 IPR003100 GO:0005515
Pral4667g00051 1009 FunFam protein argonaute 10-like 732 1009 - -
Pral4667g00051 1009 Pfam PAZ domain 378 500 IPR003100 GO:0005515
Pral4667g00051 1009 Gene3D - 734 1009 IPR036397 GO:0003676
Pral4667g00051 1009 SMART DUF1785_2 315 367 IPR014811 -
Pral4667g00051 1009 FunFam Argonaute 10 549 725 - -
Pral4667g00051 1009 Pfam Piwi domain 664 970 IPR003165 GO:0003676
Pral4667g00051 1009 Coils Coil 637 656 - -
Pral4667g00051 1009 CDD PAZ_argonaute_like 378 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00051 Pral-Chr4667 280919 285239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00051 96 1009 Eukaryotic Initiation Factors Gene Family AT1G48410 41.183 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00051 K11593 - gmx:100796107 1664.05