Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00046 ATGGGTGGAATTGGTGACCAACTCCCACTTTCGTCGGCCCCGGCCAAGACGGGGCCTCCGCCGCCTCCCTCCATTAATCCCCCACCACGCACTTCCATGGACGCACTTTTCAATGGTGGGTCCTCCGGCAGCGCCGGCTTCGGGTTCAGTAGTCCTGGTCCCATGACTCTCGTTTCTAATTTCTTCAACGACAACGAGGACTTCAAGTCCTTCTCGCAACTTCTCGCCGGCGCTATGCCGTCTCCATTGATGACGACGCACGGGAAACACTCCGTTGAAGTTGGGGGCTCCGCCGGCACTGGGCTTAAGAAGGATAGGCCCTCCGTTGAGCAGTCCCCGATGTTCATGTTTCCGCCGGCGGGGCTTAGCGCTGCTGGCTTCGTCGGTCCTCCTAGGAATTTTCCAGCTTCTGAGGTCTCAGCCGAGGCTGTGCGGGTCAACGAAAACCCATCTTCTTCCATTGGTAAGCAAGTTCAGATGATGCCACCAAGCTCTGGTACGACGTCGTCGGCAATGAAGGAATGTCCTGATGATGGATTCAACTGGCGCAAGTATGGGCAGAAACAGGTGAAAGGCAGCGAATTTCCTCGAAGTTATTACAAGTGCACGTATCAGAACTGCCCTGTGAAGAAGAAGGTTGAGAGATCTCTCGACGATGACCATGTGGTGGCCATCATTTACAAAGGACAGCATAATCATCAACGTCCTCGCCCCATTAATAACAACAAGTACGCAAAAGACGCAATCATAGGGACAACAACTTCGGATGAGAACTCAAACGCGCGAGGGACAACCTGGGAGTCATCAACAGGAGCTGAACACGAAGCAGAAGGATCAAGCGAGAGTACTGAGGAAGCTGCTGCAGGTTATTATGGCGATACTACTACTGAAATGGAGGACAAAAATGATGGGCCTGACCTAAAGAGAAGACACACAGAAGGAGGGGCTTCGCATAGGACAGCCATGGAACCAAGGATTATTGTGCAGACGACAAGTGAAGTTGACCTGCTAGATGATGGGTATAGATGGCGAAAATATGGCCAAAAAGTTGTCAAAGGCAATCCTTTCCCCAGGAGCTATTACAAGTGCACAACCACAGGTTGCAATGTTCGGAAACATGTGGAGAGAGCATCCTCAGATCCTAAAGCTGTTATTACAACGTACGAAGGAAAACACAATCACGACGTGCCGGCAGCTAAGACTAACAGCCACACTATCGCCAACAACTCAGCTTCACAGCTAAGACCCCACAACACCACAATACCAGAGAGACTTAGTTTCAATGGCGGACCTATTGGGTCCCACCAGCAACAACAGCCTGTGGCACGTCTTAGGCTGAAGGAAGAACAGATAACCTAG 1359 0.5143 MGGIGDQLPLSSAPAKTGPPPPPSINPPPRTSMDALFNGGSSGSAGFGFSSPGPMTLVSNFFNDNEDFKSFSQLLAGAMPSPLMTTHGKHSVEVGGSAGTGLKKDRPSVEQSPMFMFPPAGLSAAGFVGPPRNFPASEVSAEAVRVNENPSSSIGKQVQMMPPSSGTTSSAMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTYQNCPVKKKVERSLDDDHVVAIIYKGQHNHQRPRPINNNKYAKDAIIGTTTSDENSNARGTTWESSTGAEHEAEGSSESTEEAAAGYYGDTTTEMEDKNDGPDLKRRHTEGGASHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPFPRSYYKCTTTGCNVRKHVERASSDPKAVITTYEGKHNHDVPAAKTNSHTIANNSASQLRPHNTTIPERLSFNGGPIGSHQQQQPVARLRLKEEQIT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00046 452 Gene3D WRKY domain 163 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 Gene3D WRKY domain 322 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 SUPERFAMILY WRKY DNA-binding domain 175 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 266 418 IPR044810 GO:0003700
Pral4667g00046 452 SUPERFAMILY WRKY DNA-binding domain 329 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 MobiDBLite consensus disorder prediction 147 172 - -
Pral4667g00046 452 MobiDBLite consensus disorder prediction 251 276 - -
Pral4667g00046 452 MobiDBLite consensus disorder prediction 251 318 - -
Pral4667g00046 452 FunFam WRKY transcription factor 164 237 - -
Pral4667g00046 452 FunFam WRKY transcription factor 33 324 390 - -
Pral4667g00046 452 ProSiteProfiles WRKY domain profile. 332 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 MobiDBLite consensus disorder prediction 430 452 - -
Pral4667g00046 452 ProSiteProfiles WRKY domain profile. 171 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 MobiDBLite consensus disorder prediction 1 45 - -
Pral4667g00046 452 Pfam WRKY DNA -binding domain 338 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 Pfam WRKY DNA -binding domain 177 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 SMART WRKY_cls 176 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 SMART WRKY_cls 337 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00046 452 MobiDBLite consensus disorder prediction 296 318 - -
Pral4667g00046 452 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00046 Pral-Chr4667 230444 234413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00046 23 75 WRKY Transcription Factor Family AT2G03340 56.604 3.41e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4667g00046 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00046 - - gmx:100799335 406.371