Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00045 ATGGGTGGAATTGGTGACCAACTCCCACTTTCGTCGGCCCCGGCCAAGACGGGGCCTCCGCCGCCTCCCTCCATTAATCCCCCACCACGCACTTCCATGGACGCACTTTTCAATGGTGGGTCCTCCGGCAGCGCCGGCTTCGGGTTCAGTAGTCCTGGTCCCATGACTCTCGTTTCTAATTTCTTCAACGACAACGAGGACTTCAAGTCCTTCTCGCAACTTCTCGCCGGCGCTATGCCGTCTCCATTGATGACGACGCACGGGAAACACTCCGTTGAAGTTGGGGGCTCCGCCGGCACTGGGCTTAAGAAGGATAGGCCCTCCGTTGAGCAGTCCCCGATGTTCATGTTTCCGCCGGCGGGGCTTAGCGCTGCTGGCTTCGTCGGTCCTCCTAGGAATTTTCCAGCTTCTGAGGTCAACGAAAACCCATCTTCTTCCATTGGTAAGCAAGTTCAGATGATGCCACCAAGCTCTGGTACGACGTCGTCGGCAATGAAGGAATGTCCTGATGATGGATTCAACTGGCGCAAGTATGGGCAGAAACAGGTGAAAGGCAGCGAATTTCCTCGAAGTTATTACAAGTGCACGTATCAGAACTGCCCTGTGAAGAAGAAGGTTGAGAGATCTCTCGACGATGACCATGTGGTGGCCATCATTTACAAAGGACAGCATAATCATCAACGTCCTCGCCCCATTAATAACAACAAGTACGCAAAAGACGCAATCATAGGGACAACAACTTCGGATGAGAACTCAAACGCGCGAGGGACAACCTGGGAGTCATCAACAGGAGCTGAACACGAAGCAGAAGGATCAAGCGAGAGTACTGAGGAAGCTGCTGCAGGTTATTATGGCGATACTACTACTGAAATGGAGGACAAAAATGATGGGCCTGACCTAAAGAGAAGACACACAGAAGGAGGGGCTTCGCATAGGACAGCCATGGAACCAAGGATTATTGTGCAGACGACAAGTGAAGTTGACCTGCTAGATGATGGGTATAGATGGCGAAAATATGGCCAAAAAGTTGTCAAAGGCAATCCTTTCCCCAGGAGCTATTACAAGTGCACAACCACAGGTTGCAATGTTCGGAAACATGTGGAGAGAGCATCCTCAGATCCTAAAGCTGTTATTACAACGTACGAAGGAAAACACAATCACGACGTGCCGGCAGCTAAGACTAACAGCCACACTATCGCCAACAACTCAGCTTCACAGCTAAGACCCCACAACACCACAATACCAGAGAGACTTAGTTTCAATGGCGGACCTATTGGGTCCCACCAGCAACAACAGCCTGTGGCACGTCTTAGGCTGAAGGAAGAACAGATAACCTAG 1338 0.5112 MGGIGDQLPLSSAPAKTGPPPPPSINPPPRTSMDALFNGGSSGSAGFGFSSPGPMTLVSNFFNDNEDFKSFSQLLAGAMPSPLMTTHGKHSVEVGGSAGTGLKKDRPSVEQSPMFMFPPAGLSAAGFVGPPRNFPASEVNENPSSSIGKQVQMMPPSSGTTSSAMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTYQNCPVKKKVERSLDDDHVVAIIYKGQHNHQRPRPINNNKYAKDAIIGTTTSDENSNARGTTWESSTGAEHEAEGSSESTEEAAAGYYGDTTTEMEDKNDGPDLKRRHTEGGASHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPFPRSYYKCTTTGCNVRKHVERASSDPKAVITTYEGKHNHDVPAAKTNSHTIANNSASQLRPHNTTIPERLSFNGGPIGSHQQQQPVARLRLKEEQIT 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00045 445 FunFam WRKY transcription factor 157 230 - -
Pral4667g00045 445 Gene3D WRKY domain 315 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 Gene3D WRKY domain 156 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 MobiDBLite consensus disorder prediction 137 165 - -
Pral4667g00045 445 MobiDBLite consensus disorder prediction 1 47 - -
Pral4667g00045 445 MobiDBLite consensus disorder prediction 244 311 - -
Pral4667g00045 445 MobiDBLite consensus disorder prediction 244 269 - -
Pral4667g00045 445 FunFam WRKY transcription factor 33 317 383 - -
Pral4667g00045 445 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 259 411 IPR044810 GO:0003700
Pral4667g00045 445 SMART WRKY_cls 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 SMART WRKY_cls 330 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 Pfam WRKY DNA -binding domain 331 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 Pfam WRKY DNA -binding domain 170 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 SUPERFAMILY WRKY DNA-binding domain 322 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 MobiDBLite consensus disorder prediction 289 311 - -
Pral4667g00045 445 SUPERFAMILY WRKY DNA-binding domain 168 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 ProSiteProfiles WRKY domain profile. 164 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 MobiDBLite consensus disorder prediction 423 445 - -
Pral4667g00045 445 ProSiteProfiles WRKY domain profile. 325 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4667g00045 445 MobiDBLite consensus disorder prediction 133 165 - -
Pral4667g00045 445 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00045 Pral-Chr4667 230443 234413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00045 23 75 WRKY Transcription Factor Family AT2G03340 56.604 3.85e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4667g00045 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00045 - - gmx:100799335 403.675