Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00010 ATGGACAACGATATATGGCGCTGGATTCTTGAGTATCTCCTCAGGAGTTCCGTTCCAGATTTGATCATCAAGAATGTTTTGAATGTTTTGCCTCTCTCTGGTATCGATTCGCGGCTGTGGAAAACATTGGCTCTCAGGTCTATTCAATCGGAGGCGGCTATGGCATCATTTACAGAAAACTTACTGGAATATCTAGAGGTTGTTGAAGAAATCGACCGGCGTAATGGCGTTGCAATCACAGAAGCGATGAAGGAGGCATATTGTGCTGTTGCTGTGGACTGCAGTGTCAGGTACCTTGAGGCATGCCCGGATAAGAACACCCGCGGCTTGTTTGATGATGCTATCAATAGGATTTGGAGGGGCCGAGTTCGGCAAATGGTGGAGGCTATGGCGTCAGGGAAGAGGTGTCACTTATTTACGGCTGAGTTAATAGGGTGGAAGGACATCTTAGAGTCCGCACGTTGGGATGCAGAGGTGTGCGGGAGGTTAATGAACATGAATACCAGAAAAAATGCACTTGACAAGGTTAGGGTTTATCTAAAAGAAACTTGGGCATCCATGGGCCCTTCTTTCCTTGAAGTAGCTATATTTTCTGAAGAGAAGGGCTTGGGAAGTTCGAGGGTGGATAAGATGGGTGACGCGGAGCTTGCTGCTAGTATACCCAATGAAGGTTGTGACAAGGGTGATTCTGAATCTGTCTTGGTCTTTGATCAGATGAATAGGTGTAAAGGAACGTTATATTGTCCAACTAACATAACTGAGGAGGCTTTAGTTGTGTCTGATGGAAGTGCATTGCATAATGCTGCAATCTGCATGGGGAAGGCGCAAGTGGCAGGTGGGAATCAAGATGGCGAGCAACTGGTAGAGAGAGTCGGGTCTTCTGTTGGCAGAATTCAGGCCTTGGGTGGGACTGACTTGCCTCAGAGGACAAATGGAACAATTCAAAAGGACAAGCTGCCACTAAAACATAATTATGCTGCGCCCTCTACACGTAGAGGAGTTAAAATTATTGATACTGAGGAAGTAGGGCCAGCGACAGTGTGTAGCAAAAATCATGATGCATCTAATATTCAAGTTGAAAAACTTCGGAAATCTCTCATGTCAAGTTCTTTGGAGTTGCGAGTATTGGTGAAGGATCCTCTTCCGGATGCATTACACAAATCTAACATTGTAAGATCTGAATTAGCAACAAAGGGTGTGAATCATGAGCCTCCTTTTGAAAACCAGAGTACAATTGTAAATATACCAGAACAAAATACTTGCAGGAGCATAGTGCTTTATCAACCTATCAATGATATTTTAAGGAAACAGACTTCTGTTAATTGCAGTAATGCTCAACGTCCCAGCTTGATGGAACGAAATAGTACTGCCCATACTTATGAGTGGGATGATCCATTTAATGATTTGCCTGGGGGAAGCCCTAAGAAAAGGAGGAGAAAGATGAGATGGAGTTCTGAAGAAGAGGATGCATTAAGGGCTGGTGTAAAGAAGTTTGGCAAAGGAAACTGGAAGCCAATTCTAAGATTTTACGGCGAGATATTTTCAAAGACAGGAAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGACACGGTAG 1602 0.4382 MDNDIWRWILEYLLRSSVPDLIIKNVLNVLPLSGIDSRLWKTLALRSIQSEAAMASFTENLLEYLEVVEEIDRRNGVAITEAMKEAYCAVAVDCSVRYLEACPDKNTRGLFDDAINRIWRGRVRQMVEAMASGKRCHLFTAELIGWKDILESARWDAEVCGRLMNMNTRKNALDKVRVYLKETWASMGPSFLEVAIFSEEKGLGSSRVDKMGDAELAASIPNEGCDKGDSESVLVFDQMNRCKGTLYCPTNITEEALVVSDGSALHNAAICMGKAQVAGGNQDGEQLVERVGSSVGRIQALGGTDLPQRTNGTIQKDKLPLKHNYAAPSTRRGVKIIDTEEVGPATVCSKNHDASNIQVEKLRKSLMSSSLELRVLVKDPLPDALHKSNIVRSELATKGVNHEPPFENQSTIVNIPEQNTCRSIVLYQPINDILRKQTSVNCSNAQRPSLMERNSTAHTYEWDDPFNDLPGGSPKKRRRKMRWSSEEEDALRAGVKKFGKGNWKPILRFYGEIFSKTGRTEVDLKDKWRNLTR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00010 533 PANTHER MYB TRANSCRIPTION FACTOR 1 533 - -
Pral4667g00010 533 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 475 533 IPR017930 -
Pral4667g00010 533 MobiDBLite consensus disorder prediction 461 482 - -
Pral4667g00010 533 SMART sant 479 533 IPR001005 -
Pral4667g00010 533 CDD SANT_TRF 482 533 - -
Pral4667g00010 533 Gene3D - 473 533 - -
Pral4667g00010 533 SUPERFAMILY Homeodomain-like 477 532 IPR009057 -
Pral4667g00010 533 Pfam Myb-like DNA-binding domain 480 531 IPR001005 -
Pral4667g00010 533 ProSiteProfiles Myb-like domain profile. 475 532 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00010 Pral-Chr4667 56248 60269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4667g00010 483 531 Single Myb Histone (SMH) Gene Family AT1G15720 59.184 3.05e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4667g00010 Myb_DNA-binding 7.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00010 - - pcin:129285243 773.467