Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4667g00009 ATGGGATTTAAACGGTGTTTTGAGGCCAATGAATTTGAGGATCTTCCTTTCAACAAGGCAAAGCGTTTGGAATGCAATGACAAATTGGTTTCATTTGCTGGTACTGATAATCCCAACAGTGCTCCAGTGAAGCCTATTGCTTCAGGGAAAGATGAGGATGGCTTTTACAATATTCAGTGGTATGATGCAATCGAACCAGAGACTGTCACTGGAACCGCACATGCTGCCGAGAAGGATGTTGAGACCAGTGGCCACTTCAGCAGCGGTTATAGTGAGGACGGTTCTGGTTCTGGGGCAACATCATTGCCTGCTTCTTTAGATTCCTTGGAATTTGATTTTCCACGGAAAGCAAGTGTTCCTTTGGATGATGCCTATTCAGTTCTTGATAGCTTCCCAAGAAGACAAGTTCCTATTGGACCAAATCATCAAGCCACCATTCCAGTCTGGAAGGGAAGAGGGGGTGAGATATCAGTGTTGACAGGCTCCAATGATGTTCATGGCACTGAAGAGAGTTTGATGGGGACTTGTGTGATCTCAATGCCCAAGTCGAGCTTCTATTCTTGTAAGAACGGCAAGGAGGAAGAAGGCAGAACAGAATGTAACTGTCTGGATCAAGACTCCATCAGATGTGTTCGACAGCATGTTCAGGAAAAACGTGAAAACTTGATAAAGACTCTTGGAAATGAAACATTTATGAACTTGGGGTTTGATCGCATGGGAGAGGAGGTTGCACATAAATGGAGTGAAGAAGAAGAAGATTTATTTCATGAAATTGTCTACTCAAATCCTGCAACACTGGGTAGAAACTTTTGGAGGCGGCTGTCAGCTGCATTCCCTTCTCGAACAAAAAAGGAAATTGTCAGCTATTATTACAATGTCTTCATGCTTCGGAGAAGGGCTGCTCAGAACAGATCCAGATTTCTCAATATTGACAGTGATGATGATGAATGTCCCACAGGCAATAATGTGAGCTTCTTTGGGTTTCAAGTTTCAGAAGATGATGACTCTGCCATTGAGTCTCCTGATGATCAAGATGTCCATGTGGGAAACCAAGATAATTATTCTGATGATGATGGTGAAGATGACAACAGCGACAATGGAACTGGTGGCGATGTCATTGGTATTGGTGGGTATGACAAGGGAAACAGCACTGACTCCAGCTCTCAGATTGAGAGCTGGTCTGAACCTGTTCAACAAGTCAATGAGACTCTGGGGATTTCAATTGGTTCGGGTGTGCAAGATGATTCTTGCATGTCCTTTGAGTGTCAGATCAATATGGATGAGCCCTGCCCCCCATGTGGTCACGATTATGCTAGTCCTGCTCTGCAAGCTGGTGGATTTAAATGTGATCAGAGCCCATTCATTCCGGGCATACTTGATTTCTCCAGTGATACTCTGGAGCATGTTTATTTTTCAGAGCCTAGTGATGCTAAGGATTGGTATCCGGGGTACTCCACAGGTCCAGCCTCTGATATTGACTTCTCGGCCACATCCAAATTAATTGAAGAGTTTCTGGGTCAGGTTACTCCAGATCGGAAGACCAAAAATGACTGA 1554 0.4427 MGFKRCFEANEFEDLPFNKAKRLECNDKLVSFAGTDNPNSAPVKPIASGKDEDGFYNIQWYDAIEPETVTGTAHAAEKDVETSGHFSSGYSEDGSGSGATSLPASLDSLEFDFPRKASVPLDDAYSVLDSFPRRQVPIGPNHQATIPVWKGRGGEISVLTGSNDVHGTEESLMGTCVISMPKSSFYSCKNGKEEEGRTECNCLDQDSIRCVRQHVQEKRENLIKTLGNETFMNLGFDRMGEEVAHKWSEEEEDLFHEIVYSNPATLGRNFWRRLSAAFPSRTKKEIVSYYYNVFMLRRRAAQNRSRFLNIDSDDDECPTGNNVSFFGFQVSEDDDSAIESPDDQDVHVGNQDNYSDDDGEDDNSDNGTGGDVIGIGGYDKGNSTDSSSQIESWSEPVQQVNETLGISIGSGVQDDSCMSFECQINMDEPCPPCGHDYASPALQAGGFKCDQSPFIPGILDFSSDTLEHVYFSEPSDAKDWYPGYSTGPASDIDFSATSKLIEEFLGQVTPDRKTKND 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4667g00009 517 Gene3D - 247 308 - -
Pral4667g00009 517 SMART sant 243 296 IPR001005 -
Pral4667g00009 517 CDD SANT 246 294 IPR001005 -
Pral4667g00009 517 SUPERFAMILY Homeodomain-like 245 294 IPR009057 -
Pral4667g00009 517 MobiDBLite consensus disorder prediction 84 101 - -
Pral4667g00009 517 Pfam Myb-like DNA-binding domain 246 293 IPR001005 -
Pral4667g00009 517 MobiDBLite consensus disorder prediction 334 396 - -
Pral4667g00009 517 ProSiteProfiles Myb-like domain profile. 246 294 IPR001005 -
Pral4667g00009 517 MobiDBLite consensus disorder prediction 77 101 - -
Pral4667g00009 517 PANTHER DNA BINDING PROTEIN 1 510 - -
Pral4667g00009 517 MobiDBLite consensus disorder prediction 380 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4667g00009 Pral-Chr4667 49689 53027 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4667g00009 Myb_DNA-binding 8.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4667g00009 - - pcin:129311877 859.366