Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4665g00007 ATGCCCAGCTCGAGGCAATCCTTCTGCGTCTCTTCCTCCTCTTCTTCTTTTCTTATCGTTCTCTTTCAGTCCATTTTTCTTTATGGTTTAGCATCCACTGCAAATCATGAAGCATCTGTTCTCTTCTCTTGGCTTCATAGCTCTGCTTCACCACCACCTCCATCTTTCTCCAACTGGAACATCCTTGACGCCAGCCCATGCAATTGGACCTTCATAACATGTTCCCCGCAAGGTTTTGTCACTGAGATCAATATACAATCCATTCCTCTAGAGCTTCCTTTTCCTGCCAATCTCTCTTCATTTGCCCATCTTCAGAAACTTGTCGTTTCTGATGCCAATCTCACTGGAACCATCCCCGTTAACATTGGTGACTGCTCTGCCCTCACGGTCATTGACCTTAACTCCAATAATCTTGAAGGGGATATCCCTGCAAGTATAGGTAAGCTTAAAAACTTGGAGAGCTTGTCTCTGAACACTAACCAGCTTACAGGAAAAATCCCCATTGAGCTATGCAATTGCATTAGCATGAAAAGTATTCTCCTTTTTGACAACCAGCTAAGTGGTGTTATCCCACCTAAGCTAGGAAAGTTGTCAAAACTTGAGGTTCTTAGAGCTGGAGGAAACAAAGATTTGGTAGGGAAAATCCCTGAAGAGATTGGAGATTGTAGCAATTTGACTGAGCTGGGCCTGGCTGATACTGGTATTTCAGGCTCATTGCCAGCTTCATTGGGAAAACTGAGCAAGCTTCAGACTTTGTCCATCTACACTACAATGCTATCTGGTGAGATTCCAGCAGAGCTCGGTAACTGCTCTGAACTTGTTGATTTATTCCTATATGAAAATAGTCTATCCGGGTCTATTCCATCTGAGTTGGGTAAGCTTCAAAAACTGGAGCAATTGTTTTTATGGCAGAATAGTCTTGTGGGAGCTATCCCAGAAGAGATTGGGAACTGTACGAGCTTGAAAAGAATTGATCTCTCTTTGAATTCTCTATCTGGTAGTATACCTTTATCTTTTGGGAATCTGTTACAACTTGAGGAGTTTATGATAAGTGATAACAATGTGTCTGGGTCAATACCTCCAAGTCTTTCAAATGCCTCATATCTGCAACAACTGCAAGTTGACACAAATCAGCTCTCAGGTTTGATCCCCCCGGAGCTTGGGATGTTATCAAAGCTCACAGTTTTCTTTGCTTGGCAAAACCAACTTGAAGGAAGTATTCCTTCTCCTCTGGCAAATTGTAGTAACCTGCAAGCACTAGATTTGTCTCACAACGAACTTACTGGTAGCATTCCTGCCGGCCTATTTCAACTTCAAAACCTTTCCAAGCTACTGTTGATTTCTAATGATATTTCAGGTTCAATCCCATCAGAAATAGGCAGCTGTAGTTCTCTTATAAGATTGAGGCTTGGGAAGAATAGGATTACTGGCGGGATCCCTAAGTCAATTGGGAGCCTTAAAAACCTGAACTTTTTAGACCTCAATGAGAATCACCTTTCTGGGCAGGTCCCAGATGAGATTGGCAACTGCACGGAACTGCAAATGATAGACTTCGGCGATAACAACTTAGAAGGTCCATTGCCTAATTCATTGTCATCACTATCTTTGCTCCAAGTATTCGATGGATCTTCTAACAGATTTTCAGGTCAAATACCAGAAAGTTTGGGCCGTCTTGTTTCGCTAAATAAGCTAATCCTGGGTAGAAACTTGTTTTCCGGGCCAATTCCGGCATCATTGGGCCAATGTTCAAGTCTCCAAATGCTTGATATCAGCAGCAATGAGCTCACAGGAAGCATTCCAGCAGAGCTAGGTCATATAGAGACTCTTGAAATTGCTCTTAATCTCAGTTGCAATTCTCTAAGTGGCCCAATTCCAGAACAGATCTCTGCTCTTACCAAGCTTTCTATGCTAGACCTTTCTCATAACCAGTTAGAGGGAGATTTAAACTCACTTGCAGGGCTAGATAATCTTGTCTCTCTTAATATTTCCTACAACAATTTCACAGGTTATCTACCAGATAATAAGCTTTTTAGGCAATTATCAGCAAAGGACCTAATTGGGAATCAAGGGCTTTGCTCATCTGGTCAAGACTCGTGCTTTGTGAGTGCTTCAAGCATGACGCTGAATGGAAGTGACGTGAGGAAGTCACAAAGGATTAAGCTAGCTATTGGTTTGCTAGTAGTCTTAACAGTGCTACTAACGATAATGGGAATAATTGCAGTGATAAAGGCACGAAGAACCATTAGAGATGATGACTCAGAACTAGGGGACTTATGGCCATGGCAATTCATTCCATTCCAGAAGCTGAATTTTTCAGTGGAGCAAGTGTTGAGACGTTTAGTCGAAGGAAATATAATTGGAAAAGGATACTCTGGTGTTGTTTATCGAGCTGAAATGGATGATGGTGAAGTCATTGCTGTGAAGAAATTGTGGCCTACACCAATGGATGTAGGAGACGGATTCAAGGATGATAAAAGTGGAATTCGTGACTCATTTTCAACTGAGGTGAAAACCCTTGGCTCAATCCGTCATAAGAACATTGTTAGATTCTTGGGCTGTTGTTGGAATAAAAACACAAGACTGCTGATATATGATTATATGGCAAATGGAAGTCTAAGTAGTCTACTTCATGAGAGGACAGGAAATTGTCTGGAATGGGAACTCAGGTACAGAATTCTATTAGGAGCTGCGGAAGGCCTCGCATATTTGCATCATGACTGTGTGCCTCCCATAGTACATAGAGACATCAAAGCCAATAACATCCTCATTGGCATTGAGTTTGAGCCTTATATTGCAGACTTTGGCTTGGCTAAGCTAGTTGATGATGGTGGCTTTGGTCGGTCCTCTAATACAGTTGCTGGTTCTTATGGATATATTGCTCCAGAATATGGCTACATGATGAAGATCACAGAGAAGAGCGATGTTTATAGCTATGGTGTTGTTATGTTGGAAGTCTTGACGGGCAAGCAACCGATAGACCCGACAATACCGGATGGCCAGCATGTTGTTGATTGGGTGAGACAGAAAAGGGGGGTTGAAGTGCTTGACCAGAGCTTACTGTCAAGACCAGATTCAGAAATAGAGGAAATGATGCAGGCAGTAGGCATAGCCTTGTTGTGTGTAAACTCATCCCCAGATGAGAGGCCAACAATGAAAGATGTTGCAGCAATGCTGAAGGAGATTAAACAAGAAAGAGAAGAATATGCAAAAGTTGATGCACTTCTAAAGGGATCTCCTGCAAATGACGTCAAGGCAACATCTTCATCATTAGCAGCAGTGCAGAATTTGTACCCAGAAGGCAATAGTAATAATACAATCTTCTCTGTATCCTCACTGCTTCATTCGTCTTCTTCCAGTGCCAAAGTAGGTTTGAAGTCATGA 3381 0.4221 MPSSRQSFCVSSSSSSFLIVLFQSIFLYGLASTANHEASVLFSWLHSSASPPPPSFSNWNILDASPCNWTFITCSPQGFVTEINIQSIPLELPFPANLSSFAHLQKLVVSDANLTGTIPVNIGDCSALTVIDLNSNNLEGDIPASIGKLKNLESLSLNTNQLTGKIPIELCNCISMKSILLFDNQLSGVIPPKLGKLSKLEVLRAGGNKDLVGKIPEEIGDCSNLTELGLADTGISGSLPASLGKLSKLQTLSIYTTMLSGEIPAELGNCSELVDLFLYENSLSGSIPSELGKLQKLEQLFLWQNSLVGAIPEEIGNCTSLKRIDLSLNSLSGSIPLSFGNLLQLEEFMISDNNVSGSIPPSLSNASYLQQLQVDTNQLSGLIPPELGMLSKLTVFFAWQNQLEGSIPSPLANCSNLQALDLSHNELTGSIPAGLFQLQNLSKLLLISNDISGSIPSEIGSCSSLIRLRLGKNRITGGIPKSIGSLKNLNFLDLNENHLSGQVPDEIGNCTELQMIDFGDNNLEGPLPNSLSSLSLLQVFDGSSNRFSGQIPESLGRLVSLNKLILGRNLFSGPIPASLGQCSSLQMLDISSNELTGSIPAELGHIETLEIALNLSCNSLSGPIPEQISALTKLSMLDLSHNQLEGDLNSLAGLDNLVSLNISYNNFTGYLPDNKLFRQLSAKDLIGNQGLCSSGQDSCFVSASSMTLNGSDVRKSQRIKLAIGLLVVLTVLLTIMGIIAVIKARRTIRDDDSELGDLWPWQFIPFQKLNFSVEQVLRRLVEGNIIGKGYSGVVYRAEMDDGEVIAVKKLWPTPMDVGDGFKDDKSGIRDSFSTEVKTLGSIRHKNIVRFLGCCWNKNTRLLIYDYMANGSLSSLLHERTGNCLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGIEFEPYIADFGLAKLVDDGGFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVMLEVLTGKQPIDPTIPDGQHVVDWVRQKRGVEVLDQSLLSRPDSEIEEMMQAVGIALLCVNSSPDERPTMKDVAAMLKEIKQEREEYAKVDALLKGSPANDVKATSSSLAAVQNLYPEGNSNNTIFSVSSLLHSSSSSAKVGLKS 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4665g00007 1126 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 513 1058 - -
Pral4665g00007 1126 Gene3D Transferase(Phosphotransferase) domain 1 867 1078 - -
Pral4665g00007 1126 FunFam LRR receptor-like serine/threonine-protein kinase 532 607 - -
Pral4665g00007 1126 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Pral4665g00007 1126 Coils Coil 1051 1071 - -
Pral4665g00007 1126 Gene3D Phosphorylase Kinase; domain 1 766 866 - -
Pral4665g00007 1126 Gene3D Ribonuclease Inhibitor 443 702 IPR032675 -
Pral4665g00007 1126 Gene3D Ribonuclease Inhibitor 207 442 IPR032675 -
Pral4665g00007 1126 FunFam Putative LRR receptor-like serine/threonine-protein kinase 612 697 - -
Pral4665g00007 1126 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 433 527 - -
Pral4665g00007 1126 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Pral4665g00007 1126 Pfam Leucine rich repeat 613 667 IPR001611 GO:0005515
Pral4665g00007 1126 ProSiteProfiles Protein kinase domain profile. 780 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4665g00007 1126 SUPERFAMILY Protein kinase-like (PK-like) 758 1058 IPR011009 -
Pral4665g00007 1126 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 209 432 - -
Pral4665g00007 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 911 923 IPR008271 GO:0004672|GO:0006468
Pral4665g00007 1126 PRINTS Leucine-rich repeat signature 417 430 - -
Pral4665g00007 1126 PRINTS Leucine-rich repeat signature 631 644 - -
Pral4665g00007 1126 SUPERFAMILY RNI-like 107 468 - -
Pral4665g00007 1126 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Pral4665g00007 1126 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 763 866 - -
Pral4665g00007 1126 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Pral4665g00007 1126 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 867 1076 - -
Pral4665g00007 1126 Pfam Leucine Rich Repeat 416 434 IPR001611 GO:0005515
Pral4665g00007 1126 SMART LRR_typ_2 486 510 IPR003591 -
Pral4665g00007 1126 SMART LRR_typ_2 149 173 IPR003591 -
Pral4665g00007 1126 SMART LRR_typ_2 342 366 IPR003591 -
Pral4665g00007 1126 SMART LRR_typ_2 631 653 IPR003591 -
Pral4665g00007 1126 SMART LRR_typ_2 414 438 IPR003591 -
Pral4665g00007 1126 SMART LRR_typ_2 558 582 IPR003591 -
Pral4665g00007 1126 SMART LRR_typ_2 654 679 IPR003591 -
Pral4665g00007 1126 SMART LRR_typ_2 294 318 IPR003591 -
Pral4665g00007 1126 SMART serkin_6 780 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4665g00007 1126 FunFam Nuclear pore complex protein NUP107 34 191 - -
Pral4665g00007 1126 SUPERFAMILY L domain-like 383 718 - -
Pral4665g00007 1126 ProSitePatterns Protein kinases ATP-binding region signature. 786 809 IPR017441 GO:0005524
Pral4665g00007 1126 Pfam Protein tyrosine and serine/threonine kinase 783 1057 IPR001245 GO:0004672|GO:0006468
Pral4665g00007 1126 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Pral4665g00007 1126 SMART LRR_sd22_2 149 170 - -
Pral4665g00007 1126 SMART LRR_sd22_2 510 536 - -
Pral4665g00007 1126 SMART LRR_sd22_2 414 443 - -
Pral4665g00007 1126 SMART LRR_sd22_2 631 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4665g00007 Pral-Chr4665 58986 63686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4665g00007 35 1077 Receptor kinase-like Gene Family AT5G56040 48.677 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4665g00007 PK_Tyr_Ser-Thr 3.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4665g00007 - - gmx:100818541 1670.98