LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4661g00015	ATGGTTCATCAGAACACTCAGAACGATTCAAGAAGAAAGAAGGTGCTTGTTGATGAGCAATTTCCTCTGCTAGTGAATGAGAAAGATGTGGGTTCTCAGGGGGCATCTTTTAGTGGGTCAGTGTTCAATTTATCTACCACCATTATTGGAGCTGGAATTATGGCCTTACCTGCTGCCATGAAAGTTCTGGGATTGGGTTTGGGAATTATTGCCATAGTCTTTCTTGCGTTGCTTACGGAGACTTCCTTAGAGATTCTGATAAGGTTTAGCAGAGTAGGAAAGGCTGAGACCTATGGGGAAGTAATGCGTTTTGCCTTTGGAAGTGTTGGAAGATGGGCTTTTCAGTTATGCGTTCTGCTTAACAATTTTGGAATTCTCGTCGTCTACGTGATCATAATTGGTGATGTGCTATCTGGAACATCTTCAAGTGGAACTCATCATGCTGGTGTATTGGAAGGATGGTTTGGCGAATACTGGTGGACTGGGCGTACTTTTATTCTCCTTGTGGCAACCCTATTTGTATTTACTCCTTTGGCATTCTTCAAGCGGATAGATTCGTTGAGATATACTTCCGCTTTAGCGGTGGCACTGGCAATTGTATTTATAGTCATAACGGCGGGGATAACATTTATAAAATTGTTTAATGGTAGCATTACCAGACCCAGGTTGCTCCCTAATGTTACCGATTTTACATCTGCCTGGAAGCTCTTTACAGCAACCCCTGTTCTTGTGACAGCGTTTGTCTGTCATTACAATGTGCACACAATAGACAATGAGCTAGCAGACTCTTCCTCGATACATAAAGTTGTACGTGCTTCTCTGGTTCTATGTTCCAGTGTCTATATATTTACGGCCTTATTTGGGTTTCTTTTGTTTGGTGAATCAACCCTTGATGATGTGCTGGCCAACTTTGATACTGACCTTGGCATCCCTTACAGCAGCCTGCTCAATGACATCGTTCGCCTCAGCTATGCCCTCCACCTTATGCTTGTTTTCCCAGTCATCTTCTTCTCACTGCGCTTCAATTTTGATGATTTACTTTTCCCTTCAGCTAGGTCAATGGATTTAGATAATGTTAGGTTTGTGTTGATCACAACTGGACTCATCTCTTTTATATATGTGGCGGCAAATTTTATACCTAGCATTTGGGATGCTTTCCAATTCACTGGAGCAACTGCTACTGTTTGCCTAGGGTTCATTTTTCCTGCTGCAATTGCTCTAAGGGATCCTAATGGTATTGCAACAACGAAAGATAAGGTTTTATCTGTTGTCATGATTGTGCTGGCTGTGTCCTCAAATGTGATGGCCATATACAGTAATGCCAATGCTATCTTTAGTAAACATGTTGATCCTCATGAATGA	1362	0.42	MVHQNTQNDSRRKKVLVDEQFPLLVNEKDVGSQGASFSGSVFNLSTTIIGAGIMALPAAMKVLGLGLGIIAIVFLALLTETSLEILIRFSRVGKAETYGEVMRFAFGSVGRWAFQLCVLLNNFGILVVYVIIIGDVLSGTSSSGTHHAGVLEGWFGEYWWTGRTFILLVATLFVFTPLAFFKRIDSLRYTSALAVALAIVFIVITAGITFIKLFNGSITRPRLLPNVTDFTSAWKLFTATPVLVTAFVCHYNVHTIDNELADSSSIHKVVRASLVLCSSVYIFTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRLSYALHLMLVFPVIFFSLRFNFDDLLFPSARSMDLDNVRFVLITTGLISFIYVAANFIPSIWDAFQFTGATATVCLGFIFPAAIALRDPNGIATTKDKVLSVVMIVLAVSSNVMAIYSNANAIFSKHVDPHE	453

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4661g00015	453	Pfam	Transmembrane amino acid transporter protein	35	438	IPR013057	-
	Pral4661g00015	453	PANTHER	AMINO ACID TRANSPORTER	28	431	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4661g00015	Pral-Chr4661	170268	173186	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4661g00015	33	453	Amino Acid or Auxin Permease AAAP Family	AT3G30390	66.508	0.0	574

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4661g00015	K14207		-	gmx:100778699	679.863