Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4661g00014 ATGGTTGATTTGCTGCTTCATGATGAAATAGGGACAGTATTATTGGGTTTAAGGGTTTATATTCAGTATTTGAGCACAGGATTGTTAGCTAGAAACTGGAAGAGTTTGAACGAAGCCCAAAATAAATTCAATAAAGTTGTTGAGCGAAAAGGCGTTAATGGAGGCCAGAGTACCAAAAGTAGCACAGAATCAGAAGTGGGAGAGTTGGATATGTCTGACAAAGAAAATTTTGAGCGAGATAGAAACGAGGATCATATGAGTTATTCATCTACTATGCCCTCGGATTGGAGATTTGGGGTTCCTAATCTTGCAAATACATCAGTGGGTTTGGTGGACTCATATGTTCCAAGCTTCTGGGATCATCCCATCAGTTCCCAAAACTTGGGGTCATGCGACGTCAATGTGCAGAACAATGTTAGCTCCTCAAGCTCAACTGGAAATAGAAAAGATGGCCTTGCCTTAGCTGGTAATGATAGAACACTTGAAATGGGTTGGAATCCAACAAGTTTTATTTTAAAAGGGGATGCTTTCGCACCAGACAGACCAACAATTTTCCCGCACAGTTTGTCTCAGATTCCCACTGATTCTGCTTTTATTGAGCGAGCTGCTAGATTCTCATGCTTCGGTCAGTTCAGTGGAGGGAATTTTGGTAGTATGGTGAACTCATTTGGGATTCCTCAATCCATGGGTCTGTATGCTGGACGGGATGCTCTCGCAGGCCATGGCTTGAAATCAGCTCATGGATCACGATCTCAAGAAAGTGCTCAGGATGTAGGTGAAGCTGCAAAAGATGTGTCTCCATCTATTCAGAATTTGGCCGCTAAAGGAAGTCCACTTAACAATGACAAGAGAAGTGAAATCCTAGTGACATCTCAGGATGAAGCAAAACAGACTCTTGGCAGGTCTACTAATGAGTCTGATAGAGCAGAATCCAGTGGTGATGATGATGCTGGTGGTCAAAATGATATGCCTATGTTGGAGGGTACAAGTGGGGAGCCTTCTAACAAAGGACTAAACGCAAAGAAAAGGAAAAGAAGTGGGCAGGATTCTGATAATGAAAAAGCCAACGGAGGTTCTGAACCACCGAGTGAGGCTCCAATAGACAATTCTGAGAGCCGACAGAAGGGAGACCAGCAACCAACTTCAACAACCAACCCTTCTGTGAAGAATACCAAACAGGGGTCTCAAGCTTCTGACCCAACAAAGGAGGAATACATACATGTTAGGGCTCGCAGGGGTCAAGCAACGAATAGCCATAGCCTTGCAGAGAGAGTTAGGAGGGAAAAGATCAGCGAAAGGATGAAATTTCTTCAAGACCTTGTGCCTGGATGCAGCAAGGTGACTGGCAAGGCGGTTATGCTAGATGAAATCATTAACTATGTACAATCACTTCAACGACAGGTTGAGTTTTTGTCAATGAAACTTGCAACCGTAAATTCACGGCTGGATTTTAATCTTGAAGGACTTATTGCCAAAGATATGCTTTTGCAACGGCCAGGCCCCTCATCTGCGTTGAGGTTTTCTCCAGAAATGCCTTTGGTTTTTCCCCCTTTACATCCATCTCAACCAGGCCTTCTACAGTCAAATCTTCCTGGCATAGCGAACTCATCTGATGTACTACGAAGAACCATTCGTCCACAGTTGGCTCCAATGGTTGGAGGATTCAAGGATCCTAATCAGCTACCTGAGATGTGGGAGGATGAACTGCACAATGTTGTACAGATGAGCTACGCACCAACTGCTCCACTGAGTAGTCAAGACGAGGATGGTAATGCACAAGCAGGTGAGATGAAAGTTGAACGATGA 1806 0.4419 MVDLLLHDEIGTVLLGLRVYIQYLSTGLLARNWKSLNEAQNKFNKVVERKGVNGGQSTKSSTESEVGELDMSDKENFERDRNEDHMSYSSTMPSDWRFGVPNLANTSVGLVDSYVPSFWDHPISSQNLGSCDVNVQNNVSSSSSTGNRKDGLALAGNDRTLEMGWNPTSFILKGDAFAPDRPTIFPHSLSQIPTDSAFIERAARFSCFGQFSGGNFGSMVNSFGIPQSMGLYAGRDALAGHGLKSAHGSRSQESAQDVGEAAKDVSPSIQNLAAKGSPLNNDKRSEILVTSQDEAKQTLGRSTNESDRAESSGDDDAGGQNDMPMLEGTSGEPSNKGLNAKKRKRSGQDSDNEKANGGSEPPSEAPIDNSESRQKGDQQPTSTTNPSVKNTKQGSQASDPTKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNSRLDFNLEGLIAKDMLLQRPGPSSALRFSPEMPLVFPPLHPSQPGLLQSNLPGIANSSDVLRRTIRPQLAPMVGGFKDPNQLPEMWEDELHNVVQMSYAPTAPLSSQDEDGNAQAGEMKVER 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4661g00014 601 Gene3D - 411 486 IPR036638 GO:0046983
Pral4661g00014 601 MobiDBLite consensus disorder prediction 49 90 - -
Pral4661g00014 601 FunFam Basic helix-loop-helix transcription factor 411 483 - -
Pral4661g00014 601 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 412 483 IPR036638 GO:0046983
Pral4661g00014 601 MobiDBLite consensus disorder prediction 242 266 - -
Pral4661g00014 601 CDD bHLH_AtBPE_like 404 489 - -
Pral4661g00014 601 MobiDBLite consensus disorder prediction 352 400 - -
Pral4661g00014 601 MobiDBLite consensus disorder prediction 337 351 - -
Pral4661g00014 601 Coils Coil 461 481 - -
Pral4661g00014 601 Pfam Helix-loop-helix DNA-binding domain 417 465 IPR011598 GO:0046983
Pral4661g00014 601 MobiDBLite consensus disorder prediction 290 401 - -
Pral4661g00014 601 MobiDBLite consensus disorder prediction 51 65 - -
Pral4661g00014 601 MobiDBLite consensus disorder prediction 579 601 - -
Pral4661g00014 601 MobiDBLite consensus disorder prediction 300 315 - -
Pral4661g00014 601 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 414 464 IPR011598 GO:0046983
Pral4661g00014 601 MobiDBLite consensus disorder prediction 66 86 - -
Pral4661g00014 601 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 298 510 IPR024097 GO:0006355
Pral4661g00014 601 SMART finulus 420 470 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4661g00014 Pral-Chr4661 147839 167431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4661g00014 69 578 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 44.084 1.24e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4661g00014 HLH 8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4661g00014 - - gmx:100797720 702.975