Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4660g00015 ATGGTTCCCAATGAGATAGGAGGGTTTCACTATTCAGCTCCTGAAAACCCCATCTTAGTTCCTCCAAACTTTGGCTTGTTTCAACATGGTGATATCCAAAACCAGCTTCACCTGAACACCCTCTTGAGCAATTTGCCAAACTGCTACTTCCCTTCTGGTTCAGGAAGCCTTGAGTTTATCCCTCCTCGTCCACCTGCTTCTTCAAGCTGCCTCAGTAGCAACTCAACTTCTGATGAGGCTGATGAGATTCAGCTCAGTATCATTGATGAAAGGAGGCAGAGGCGAATGATATCAAACAGAGAGTCCGCTAGGAGGTCCAGGATGAGGAAGCAGAAGCACTTGGATGAACTGTGGTCACAAGTGGTGAGGCTTAGGAATGAGAACTACAACCTCATTGACAAACTGAACCATGTGTCTGAGTCACATGATAGAGTTGTTCAGGAGAATGCACGCCTCAAGGAAGAAGCTTCTGATCTTCGTCAGCTGCTTGCTGACCTAAAAATTAGCTCTTCTTTTGCTGACACCATGAGCGATTTTGATGAACTCAGAGCTGAGCTCTCAAACTAA 567 0.4586 MVPNEIGGFHYSAPENPILVPPNFGLFQHGDIQNQLHLNTLLSNLPNCYFPSGSGSLEFIPPRPPASSSCLSSNSTSDEADEIQLSIIDERRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENYNLIDKLNHVSESHDRVVQENARLKEEASDLRQLLADLKISSSFADTMSDFDELRAELSN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4660g00015 188 CDD bZIP_plant_GBF1 92 143 IPR045314 GO:0003700|GO:0006355
Pral4660g00015 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
Pral4660g00015 188 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Pral4660g00015 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Pral4660g00015 188 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 174 IPR044521 -
Pral4660g00015 188 FunFam BZIP transcription factor 89 140 - -
Pral4660g00015 188 Coils Coil 135 169 - -
Pral4660g00015 188 Pfam bZIP transcription factor 91 140 IPR004827 GO:0003700|GO:0006355
Pral4660g00015 188 Gene3D - 89 144 - -
Pral4660g00015 188 SUPERFAMILY Leucine zipper domain 91 141 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4660g00015 Pral-Chr4660 116018 116928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4660g00015 61 173 bZIP Transcription Factor Family AT3G30530 65.217 2.86e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4660g00015 bZIP_1 3.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4660g00015 - - gmx:778126 254.988