Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4657g00007 ATGACGAAGGCAGCTTCTTCAACTGATCAAAAGAATGGATTGAAGAAAGGTCCGTGGACTCCCGAAGAAGATCAGAAGCTTGTCGATTACATTCATAAACATGGGCACGGCAAATGGCGTACTCTTCCCAAGAATGCCGGACTTAAGAGATGTGGAAAGAGTTGCCGGCTACGCTGGACAAACTACTTAAGGCCAGATATAAAGCGAGGCAGATTCTCGTTCGAGGAAGAAGAAACCATCATCCAGTTACACAGTGTTTTGGGAAACAAGTGGTCCACGATTGCTGCTAGCTTGCCGGGAAGAACAGATAATGAGATCAAGAATTATTGGAATACCCATATCAAGAAAAGGCTGTTGAAGATGGGGATTGATCCAGTGACTCACACGCCATGCTTGGATATTCAACAACTCTCCTCCATTCTCAACTTTTCTCTCTACGACTCACCTCGTGTTAACCATCCTCCCCACTTTGGAATGGCAAATAATATATTAAATCCAAGCCTCTTAAGCTTGCTCGCAGCTTTCTTGTCATCATCTCAGAACCCAGATGCGTCGAATCAAACTTTCCAGCAAAATTACCAGCTGAATAACTCTATCCAGACCTTCCCTCTTCAAGAAAACCAGTCTTGTGCTGCTTCACAGCCTCTATCTCTGGAATCTCAACTCATGAGAGACAAAATAGATCAAATGATCTCTCCTCCAGATACCACTAATTTTAGCTACCAAAGTAGCCTACCAAATGAGGGGCAGTGCCAAGGAGGTCATAATTACCCTACCAGTCTTTTGGAGAGTCATCAGATTGCACTAAACACCAGAGGCGAGCCGAATTTCACTTTAGGGTCATTGATATCGTACTCGACACCTTCATCTTCTACTAGCCCGAGCAATTTGAATTCGTCAGCATCTTCCACAACATTCGTCAAGGGTGCCACTGAAGAGGAAAGGGACACTTACTGCAGCAACATGCTGATGTATAACATCTCAAATGGCTTAAATATTGATGGCCCTTGTATTTTGTGA 1020 0.4392 MTKAASSTDQKNGLKKGPWTPEEDQKLVDYIHKHGHGKWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHTPCLDIQQLSSILNFSLYDSPRVNHPPHFGMANNILNPSLLSLLAAFLSSSQNPDASNQTFQQNYQLNNSIQTFPLQENQSCAASQPLSLESQLMRDKIDQMISPPDTTNFSYQSSLPNEGQCQGGHNYPTSLLESHQIALNTRGEPNFTLGSLISYSTPSSSTSPSNLNSSASSTTFVKGATEEERDTYCSNMLMYNISNGLNIDGPCIL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4657g00007 339 SMART sant 68 116 IPR001005 -
Pral4657g00007 339 SMART sant 15 65 IPR001005 -
Pral4657g00007 339 Gene3D - 71 118 - -
Pral4657g00007 339 FunFam MYB-related transcription factor 15 68 - -
Pral4657g00007 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Pral4657g00007 339 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Pral4657g00007 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Pral4657g00007 339 MobiDBLite consensus disorder prediction 1 21 - -
Pral4657g00007 339 CDD SANT 71 114 IPR001005 -
Pral4657g00007 339 Gene3D - 13 69 - -
Pral4657g00007 339 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pral4657g00007 339 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 275 - -
Pral4657g00007 339 CDD SANT 18 63 IPR001005 -
Pral4657g00007 339 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Pral4657g00007 339 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral4657g00007 339 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral4657g00007 339 FunFam Transcription factor MYB39 71 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4657g00007 Pral-Chr4657 34399 35958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4657g00007 4 338 MYB Transcription Factor Family AT4G21440 45.380 9.99e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4657g00007 Myb_DNA-binding 8.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4657g00007 K09422 - gmx:100820398 359.762