Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4657g00002 ATGATTCTCAACTTGACTCTTAATTCCCTTCTCCTGATTTTGTTGTGTCTGCCCTTGCAGTCCACAGACGCAATTACATATAAAGAAACGTTGCGAATGGGCCAAGTACTTGGAGCCTCAGATACCTTGGTATCTGCTAATGGCAATTTCGAACTGCGATTTTTCCGTAAAGAGAATCCAACCAGGTACTATGCAGGGATACGGCTCAAGAAAGTTCCTGGAGAGAATATTGTTTGGGTTGCGAGCAGAAAGCACCCAGCCACCGATTCCAAAGCGGTTCTTACTGTTGATAATAGGGACGGAAATCTTGTAATTAAGGATGACGGAGTGGAATACCAGGTCACCGACATTTCCGATATCAGCAGTACATATGTTATGCTCTTGGATTCGGGTAATCTCTTGCTAGTGAACAACTCCAACTTGAATGTTTTATGGCAAAGTTTCGACCACCCCACAGATACCCTTGTTCCTGGAATGAAAGTAGGATTTGACGTTGAATCAGGAAACAATTGGTCCTTGATATCATGGGCAAGTGTAGATGACCCAAGTCCTGGAATTTTCTCTCTTCAAGTTGGCGGGTCCAACGACGGGCGTAGGCTAATCATCAAGAGAAATTCTGACACATATTGGGTTGGCGATGTGCTAACAGATTTCTTGTTTCAACGTTCTGATAACATAAACAATGCTACAGGGGATGTGGGCTATTTCGTTTGGCAAGGGAACTATACTTCTCGATTGGTTCTGGAAGTTTCTGGGGAGCTTAACCAGCAAATATGGTCGTCTCATAACAAGCAGTGGGTTTCTTTGCTGTCATCCAAGTGCAGAATAGATGCATGCGGAAATTTTGGCATTTGTAATCCACAAGCCCTTGATCCTTGCGAGTGTTTTCCAGGTTTTAGGCCGCACGATGAAGATTCTTGGAAGAAGGGGAACACAAAAGCAGGTTGTGTGAGGAAAACAGAGTTGCTCTGCAGAGACGGGAGCAGTAATGGACCGCCTGACGGGTTTTTTCCATTTAGCGGAGTGTATTTTCCTTCCGCTAGTCTGCTTCCCCTCAAAATTCAGAACGCATACAAATGTCAAAGATATTGCTCAACCAAATGTAATTGCGTGGCCTATGTTTACGATGTCTCGGGTCGCTGCTTAATATGGCTTAATCAATTGCTGAACTTCAAAAACATCTCGGTAGACGTTGGAGGAAATAATTCTAGACCAAGTTTCTATCTCAAAGTTGCTGGTTCTGAGTTGATTAGCAATGTGTCGAATGCAGGGAATAATCGAGATCATAAGCCTAATCAAAGCCGGAAGAAGTTACTAACAGTTGTAATAGTTATCTTATTTGTTGCACTGCTTATAGCAGCTCTATTTGCTTACTACTGCCGGAGGAGAAAGCTTAGGGGAGAAGGGGAGGATCTGCTACTGTTTGATCCAGGTATGAGCATGAAAGTTGAGATGTCAGAGCTTACTGATGTCGATAAGGCTGGAAGAGTTAACAGGAGTGATGTCAAGTTGCCATTGTTTAGTTTTGCAAGCGTTTCTGCAGCAACTAATAACTTTTCACCTGAAAATAAGCTTGGTGAGGGCGGCTTTGGACCCGTTTACAAGGGTAAGCTGTTGAATGGGGATGAGGTTGCTGTCAAAAGGCTATCTGCGAGATCAGGTCAAGGATGGGAGGAGTTGAAAAATGAGGCAATGCTCATTGCAAAACTCCAACACAACAATCTTGTCAGGCTTTTGGGTTGCTGCGTTGAACGTGATGAAAAGATGCTTATTTATGAATTCATGCCTAACAGAAGTTTGGATTTTTTCCTATTCGATGCAACAAAACGCACAATTTTAGCTTGGGAAACCCGAGTTCGGATAATCCAAGGGATTGCCCAAGGTCTTCTTTATCTTCATCAATATTCTAGGTTCCGAATCATTCATAGAGATCTAAAAGTTAGCAATATTTTGCTGGACATCGACATGAATCCCAAAATATCAGATTTTGGTTTGGCAAGACTATTTGGTGGAAATGAATTGCAAGCAAATACAAACCGGATTGTTGGCACTTATGGATATATGTCTCCTGAATATGCATTAGAAGGCATTTTCTCAATCAAATCAGATGTATTTAGCTTTGGAGTCCTTTTGTTGGAAATAATAAGCGGCAAAAAGAATACTGGTTTATATAATACAAACTCCCTCAATCTTCTTGGATATGCATGGGACCTATGGACAAGTGGGAGAGGAACAGAGCTGATGGATTCAGCGTTAAAGGATGAATCGATACAGAAAATTGTGGTGCGAAGATACGTGAACATAGCACTGCTTTGTGTTCAAGAAAGTGCAGAAGACAGACCGACCATGTCTGATGTTGTTTCAATGCTTGGGAATGAGAATATAGTCCTACCTTTTCCTAAGCCCATAGCTTTCCTAAATGTAAGGGGTATCAGGACTTCAAGATCAGACGGAAGCTCGGCAGAAAATGTTTCTACTAATAACATGACTGCTTCGGTTATGGAAGCAAGATGA 2514 0.4216 MILNLTLNSLLLILLCLPLQSTDAITYKETLRMGQVLGASDTLVSANGNFELRFFRKENPTRYYAGIRLKKVPGENIVWVASRKHPATDSKAVLTVDNRDGNLVIKDDGVEYQVTDISDISSTYVMLLDSGNLLLVNNSNLNVLWQSFDHPTDTLVPGMKVGFDVESGNNWSLISWASVDDPSPGIFSLQVGGSNDGRRLIIKRNSDTYWVGDVLTDFLFQRSDNINNATGDVGYFVWQGNYTSRLVLEVSGELNQQIWSSHNKQWVSLLSSKCRIDACGNFGICNPQALDPCECFPGFRPHDEDSWKKGNTKAGCVRKTELLCRDGSSNGPPDGFFPFSGVYFPSASLLPLKIQNAYKCQRYCSTKCNCVAYVYDVSGRCLIWLNQLLNFKNISVDVGGNNSRPSFYLKVAGSELISNVSNAGNNRDHKPNQSRKKLLTVVIVILFVALLIAALFAYYCRRRKLRGEGEDLLLFDPGMSMKVEMSELTDVDKAGRVNRSDVKLPLFSFASVSAATNNFSPENKLGEGGFGPVYKGKLLNGDEVAVKRLSARSGQGWEELKNEAMLIAKLQHNNLVRLLGCCVERDEKMLIYEFMPNRSLDFFLFDATKRTILAWETRVRIIQGIAQGLLYLHQYSRFRIIHRDLKVSNILLDIDMNPKISDFGLARLFGGNELQANTNRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIISGKKNTGLYNTNSLNLLGYAWDLWTSGRGTELMDSALKDESIQKIVVRRYVNIALLCVQESAEDRPTMSDVVSMLGNENIVLPFPKPIAFLNVRGIRTSRSDGSSAENVSTNNMTASVMEAR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4657g00002 837 CDD STKc_IRAK 525 790 - -
Pral4657g00002 837 SMART ntp_6 331 411 IPR003609 -
Pral4657g00002 837 SMART blect_4 34 151 IPR001480 -
Pral4657g00002 837 Gene3D - 23 149 IPR036426 -
Pral4657g00002 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Pral4657g00002 837 FunFam Uncharacterized protein 494 594 - -
Pral4657g00002 837 SUPERFAMILY Protein kinase-like (PK-like) 501 790 IPR011009 -
Pral4657g00002 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Pral4657g00002 837 Pfam Protein tyrosine and serine/threonine kinase 522 790 IPR001245 GO:0004672|GO:0006468
Pral4657g00002 837 CDD PAN_AP_plant 320 412 - -
Pral4657g00002 837 SMART serkin_6 519 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4657g00002 837 PIRSF SRK 1 837 IPR024171 GO:0004674
Pral4657g00002 837 Pfam S-locus glycoprotein domain 225 302 IPR000858 GO:0048544
Pral4657g00002 837 Pfam PAN-like domain 334 390 IPR003609 -
Pral4657g00002 837 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 123 814 - -
Pral4657g00002 837 Gene3D Phosphorylase Kinase; domain 1 494 594 - -
Pral4657g00002 837 ProSiteProfiles Protein kinase domain profile. 519 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4657g00002 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 182 IPR036426 -
Pral4657g00002 837 ProSiteProfiles PAN/Apple domain profile. 324 412 IPR003609 -
Pral4657g00002 837 MobiDBLite consensus disorder prediction 814 837 - -
Pral4657g00002 837 Gene3D Transferase(Phosphotransferase) domain 1 595 796 - -
Pral4657g00002 837 Pfam D-mannose binding lectin 77 176 IPR001480 -
Pral4657g00002 837 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4657g00002 Pral-Chr4657 4994 8607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4657g00002 433 827 Receptor kinase-like Gene Family AT4G05200 49.136 6.01e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4657g00002 PK_Tyr_Ser-Thr 8.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4657g00002 - - pcin:129299332 1211.44