Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4656g00002 ATGAAATTGCCGGACACATCTGCTTCCTGGTACAACACTACCATGAGTTTGCAGGAATGTGAAAAACTATGTTTGAGAAACTGCACTTGCGCGGCATATTCTAATTTGAACATCAGTGATGGAGGAAGTGGCTGCTTGCACTGGTTTAATAACATTGTCGACTTGAGAGAACTCAAAGAGGGAGGACAAGACTTCTACATTCGAGTATCTGCAGTTTCAGGCCTAGTGAAAAATGGCATGGACAAGAGGAGGCTTGCAGGAATTGTGATAGGCTGCGCTACATTAATCATCAGCATAGTAATACTCGGATTGATAATTAGGAAGAAGCTCATGCATCCAGGGAAAGCAATTTATTGGAGGGACAAGAATGACAAAGAAGACATTGATTTGCCAATATTTGAATTTTCAACCATTTCTAATGCCACAGATCAATTTTCAGAGAGGAATAAGTTGGGACAAGGTGGTTTTGGACCGGTGTACAAGGGCGTACTAGTAGATGGACAAGAGATTGCAGTAAAGAGACTCTCCAAAACATCAGGACAAGGAATGGATGAGTTTAAAAACGAAGTTTTATTGATTGCAAAACTCCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAACAGGGAGAAAAGTTGTTGATTTATGAATTCATGCTTAATGGAAGCTTAGACTACTTTATTTTTAATTCAACAAAAACTAAGCTACTAGATTGGACTAAACGATTTCATATTATTGATGGGATTGCTCGAGGCCTTCTCTATCTTCATCAAGATTCAAGATTGCGAATAATCCATAGAGATCTTAAAACCAGCAACATTCTTCTTGATATTAATATGAATCCAAAAATATCAGACTTTGGACTTGCTAGAATTTTTGGAGGAGATCAAGCTGAGGCCAACACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCAGAATATGCAGTGCATGGATCTTTTTCTGACAAATCTGATGTCTTTAGTTTTGGAGTAATGGTATTAGAGATAATAAGTGGGAAGAAGAATAGGGGATTTTGCGATCCACATTATCGTCTTAACCTTCTGGGACATGCATGGAAACTATGGATTGAAAAAAGACCCATGGACCTAATGGATGAACAACTGCAAGATTCAGTTATTTCATCCGAGCTGTTAAGATGTATTCAGGTGGGTCTATTATGTGTGCAACAAAGACCGGAGGATAGACCCAACATGTCCACTGTGATTTTAATGTTGAATGGTGAAAAGTCACTTCCTAATCCAGGAGAGCCTGGGTTCTACATTGGAAGTGATAATCAACCCTTAGCAGATTCTACTATAAGAAGCAGCGGAGAGTGTTCAATTAATGAAGCTTCCAACTCAACATTAGAGCCAAGATAG 1392 0.3886 MKLPDTSASWYNTTMSLQECEKLCLRNCTCAAYSNLNISDGGSGCLHWFNNIVDLRELKEGGQDFYIRVSAVSGLVKNGMDKRRLAGIVIGCATLIISIVILGLIIRKKLMHPGKAIYWRDKNDKEDIDLPIFEFSTISNATDQFSERNKLGQGGFGPVYKGVLVDGQEIAVKRLSKTSGQGMDEFKNEVLLIAKLQHRNLVKLLGCSIQQGEKLLIYEFMLNGSLDYFIFNSTKTKLLDWTKRFHIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDINMNPKISDFGLARIFGGDQAEANTNRVMGTYGYMPPEYAVHGSFSDKSDVFSFGVMVLEIISGKKNRGFCDPHYRLNLLGHAWKLWIEKRPMDLMDEQLQDSVISSELLRCIQVGLLCVQQRPEDRPNMSTVILMLNGEKSLPNPGEPGFYIGSDNQPLADSTIRSSGECSINEASNSTLEPR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4656g00002 463 Pfam Protein tyrosine and serine/threonine kinase 148 413 IPR001245 GO:0004672|GO:0006468
Pral4656g00002 463 ProSiteProfiles Protein kinase domain profile. 145 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4656g00002 463 CDD STKc_IRAK 151 418 - -
Pral4656g00002 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Pral4656g00002 463 Pfam PAN-like domain 1 55 IPR003609 -
Pral4656g00002 463 CDD PAN_AP_plant 1 70 - -
Pral4656g00002 463 SUPERFAMILY Protein kinase-like (PK-like) 130 416 IPR011009 -
Pral4656g00002 463 SMART serkin_6 145 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4656g00002 463 ProSiteProfiles PAN/Apple domain profile. 1 70 IPR003609 -
Pral4656g00002 463 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 221 424 - -
Pral4656g00002 463 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 442 - -
Pral4656g00002 463 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 113 220 - -
Pral4656g00002 463 SMART ntp_6 1 69 IPR003609 -
Pral4656g00002 463 MobiDBLite consensus disorder prediction 442 463 - -
Pral4656g00002 463 Gene3D Phosphorylase Kinase; domain 1 119 220 - -
Pral4656g00002 463 Gene3D Transferase(Phosphotransferase) domain 1 221 423 - -
Pral4656g00002 463 Gene3D Hepatocyte Growth Factor 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4656g00002 Pral-Chr4656 25789 28408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4656g00002 93 434 Receptor kinase-like Gene Family AT4G23230 54.108 1.53e-131 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4656g00002 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4656g00002 - - gmx:100802416 672.159