Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4655g00007 ATGGATCTGCCATTCTTTGACCTGTTATCGATTGCTGCTGCTACTTGCGACTTCTCAATGGACAATAAAATTGGAGAAGGTGGATTTGGACCTGTATATAAGGGAAAACTGAAAGACGGGATTGAAATTGCTGTGAAGAGGCTTTCGGAAAAGTCAGGACAAGGATTAACTGAGTTCAAGAATGAAGTAAAACTGATCGCCAAACTTCAACACCGCAATCTTGTAAGGCTCCTTGGTTGTTGCCTTCAAGGGGAGGAGAAAATGCTGGTTTATGAATACATGCCTAATGGTAGTTTGGACTCCTTTATTTTTGATGAGAACAAGGGTAAATTATTAGATTGGTCAAAGCGTTTTAACATAATTCTGGGAATTGCAAGAGGGGTTATCTATCTTCATCAAGATTCCAGATTAAGGATCATTCATAGAGACCTCAAAGCAAGTAATGTCTTACTGGATAAAGAGATGAATCCAAAAATTTCGGATTTCGGCATGGCTAGAATTTTTGGAGATCAAAATGAAGTAAACACAAAGAGAATAGTTGGCACTTATGGTTATATGGCACCAGAATACGCAACTGATGGGCTATTTTCTGTGAAATCTGATGTCTTTAGTTTTGGAGTTTTGGTGCTGGAGATTATATCTGGGAAAAGAAGCAGAGGATATTATAACCCAAATCACAGCCTTAACCTCATTGGTCATGCATGGAAACTGTGGAAGGAAGGGAAACCATTAGAACTGATTGATTCAAGCATACAAGACTCATGCTCGCTATCACAAATATTGCATTGCATACGTGTCAGTCTCCTGTGTGTTCAACAGCATCCAGAGGATAGACCAGGAATGTCTTGTGCCCTATTGATGTTCTTAAGCGAGATCGAATTGCCTGAGCCTAAACAGCCTGGTTACTTTGGGAATGCTTCTGTGGAAGCATATTCCTTGGGAGCTAAACAGGAACTGAGCTCAACAAACGAAATAACCATTACCCTATTAGAACCTCGATGA 1002 0.4002 MDLPFFDLLSIAAATCDFSMDNKIGEGGFGPVYKGKLKDGIEIAVKRLSEKSGQGLTEFKNEVKLIAKLQHRNLVRLLGCCLQGEEKMLVYEYMPNGSLDSFIFDENKGKLLDWSKRFNIILGIARGVIYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGMARIFGDQNEVNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLVLEIISGKRSRGYYNPNHSLNLIGHAWKLWKEGKPLELIDSSIQDSCSLSQILHCIRVSLLCVQQHPEDRPGMSCALLMFLSEIELPEPKQPGYFGNASVEAYSLGAKQELSSTNEITITLLEPR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4655g00007 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Pral4655g00007 333 SUPERFAMILY Protein kinase-like (PK-like) 4 287 IPR011009 -
Pral4655g00007 333 CDD STKc_IRAK 24 282 - -
Pral4655g00007 333 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 94 296 - -
Pral4655g00007 333 Gene3D Transferase(Phosphotransferase) domain 1 94 296 - -
Pral4655g00007 333 ProSiteProfiles Protein kinase domain profile. 18 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4655g00007 333 SMART serkin_6 18 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4655g00007 333 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 333 - -
Pral4655g00007 333 Pfam Protein tyrosine and serine/threonine kinase 19 282 IPR001245 GO:0004672|GO:0006468
Pral4655g00007 333 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1 93 - -
Pral4655g00007 333 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Pral4655g00007 333 Pfam Domain of unknown function (DUF3403) 292 333 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4655g00007 Pral-Chr4655 20578 22973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4655g00007 6 302 Receptor kinase-like Gene Family AT4G23230 61.204 1.55e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4655g00007 PK_Tyr_Ser-Thr 9.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4655g00007 - - gmx:100778155 551.592