Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4655g00006 ATGGATACTTTTGCGATTGTTCTTGTCCTTTGTCTTGAAGTATCCTTGGTAGTTTTTTGCGTTGTTCAATCGCAGCTCATTACTGATGGCATGACCTTAGTTTCCGAAGGTGGAACCTTTGAACTAGGTTTCTTCAGTCCTGGTTCGTCCCAGAAACGTTATCTTGGAGTTTGGTACAGAAACATCCCAGTTCAAACGGTTGTTTGGGTGGCCAACCGCAACAATCCAATCAATGATTCCTCTGGCATCCTAACCTTAAACAGCACTGGAAACCTCGTACTCAGCCAAAATGACACAGTCGTTTGGTCTACAACCTCCCTGAGAAAGCCAGAGAGTCCGGAGGCCCTGCTTTTAGATTCTGGCAATTTAGTGGTAAGAGACAAGAAAGACCCAAACCCAGAAGCCTTTTTATGGCAAAGCTTCGATTATCCCGGTGATACATTCTTGCCAGGTATGAAGTTTGGGTGGGACTTAAGAACTGGTCTAAATAGGAACATGACAGCTTGGAAGAGTCCAGATGATCCAGCTACTGGAGACTTCTCGTGGGGCATGGTTCTTTATAGCAATCCTGATGCTTACATGATGTTGGGTGATCAGAGGTTTTACAGAGCTGGGCCTTGGAATGGACTGCGTCCTACTGGTTCACCACAACTAAAGGATAATCCTCTGTTTCACTTCGAGTTTGTGCAAACCAAGGATGAGGTGTACTTCATGTACCACCTTAAAAACAAGTCTGTGATCACAAGACAAGTGCTGAACCAAACAATTAAAGCTCGACAACGCTTTGTGTGGTTAGAAGAAGATAAAGTTTGGAGGGTTTATGCTTCTGTGCCATTGGACTTGTGCGATAGCTATGATCTGTGTGGAGCTTACGGAACCTGCGTGATATCAGGATCACCAGTTTGCCAATGTTTAAAAGGATTTGAGCCTAAGTCACCGGAAGCATGGGACTCAATGGACTGGTCTAAAGGCTGCGTCCGAAAGAAGCCACTAAGCTGTGAGGACAAAATCAAGGATGGGTTTATCAAATTCGATGGCTTGAAATTGCCAGATACTGAACACTCTTGGCTTGATAAGACAATGAATCTAGAGCAATGCAGAGAGATGTGCTTGAACAATTGTTCTTGTATGGCCTACACTAATTCAAATATAAGTGGACAAGGTAGTGGCTGCGCCTTGTGGTTTGGCGATCTAATTGACATGAGGCAGTTTCCAGCTGGTGGGCAGGATCTATTTGTTCGAATGTCTGCCTCAGAACTAGAAGCTGAGAATAACAGCAAGAAGGTGGGGATCTTGGTGGCAGTAATAGTAACTGTTTCTATAGCTACAATTACTGCTGCACTCATTTTGGGGTGGCGTTATACCCAGAAAGGAAGCAAGATAAAGACAGACCACAGCATCAAAGTAGATCACGAACAGAGCCAAGGGGATGATGACATGGATCTGCCATTCTTTGACCTGTTATCGATTGCTGCTGCTACTTGCGACTTCTCAATGGACAATAAAATTGGAGAAGGTGGATTTGGACCTGTATATAAGGGAAAACTGAAAGACGGGATTGAAATTGCTGTGAAGAGGCTTTCGGAAAAGTCAGGACAAGGATTAACTGAGTTCAAGAATGAAGTAAAACTGATCGCCAAACTTCAACACCGCAATCTTGTAAGGCTCCTTGGTTGTTGCCTTCAAGGGGAGGAGAAAATGCTGGTTTATGAATACATGCCTAATGGTAGTTTGGACTCCTTTATTTTTGATGAGAACAAGGGTAAATTATTAGATTGGTCAAAGCGTTTTAACATAATTCTGGGAATTGCAAGAGGGGTTATCTATCTTCATCAAGATTCCAGATTAAGGATCATTCATAGAGACCTCAAAGCAAGTAATGTCTTACTGGATAAAGAGATGAATCCAAAAATTTCGGATTTCGGCATGGCTAGAATTTTTGGAGATCAAAATGAAGTAAACACAAAGAGAATAGTTGGCACTTATGGTTATATGGCACCAGAATACGCAACTGATGGGCTATTTTCTGTGAAATCTGATGTCTTTAGTTTTGGAGTTTTGGTGCTGGAGATTATATCTGGGAAAAGAAGCAGAGGATATTATAACCCAAATCACAGCCTTAACCTCATTGGTCATGCATGGAAACTGTGGAAGGAAGGGAAACCATTAGAACTGATTGATTCAAGCATACAAGACTCATGCTCGCTATCACAAATATTGCATTGCATACGTGTCAGTCTCCTGTGTGTTCAACAGCATCCAGAGGATAGACCAGGAATGTCTTGTGCCCTATTGATGTTCTTAAGCGAGATCGAATTGCCTGAGCCTAAACAGCCTGGTTACTTTGGGAATGCTTCTGTGGAAGCATATTCCTTGGGAGCTAAACAGGAACTGAGCTCAACAAACGAAATAACCATTACCCTATTAGAACCTCGATGA 2439 0.4268 MDTFAIVLVLCLEVSLVVFCVVQSQLITDGMTLVSEGGTFELGFFSPGSSQKRYLGVWYRNIPVQTVVWVANRNNPINDSSGILTLNSTGNLVLSQNDTVVWSTTSLRKPESPEALLLDSGNLVVRDKKDPNPEAFLWQSFDYPGDTFLPGMKFGWDLRTGLNRNMTAWKSPDDPATGDFSWGMVLYSNPDAYMMLGDQRFYRAGPWNGLRPTGSPQLKDNPLFHFEFVQTKDEVYFMYHLKNKSVITRQVLNQTIKARQRFVWLEEDKVWRVYASVPLDLCDSYDLCGAYGTCVISGSPVCQCLKGFEPKSPEAWDSMDWSKGCVRKKPLSCEDKIKDGFIKFDGLKLPDTEHSWLDKTMNLEQCREMCLNNCSCMAYTNSNISGQGSGCALWFGDLIDMRQFPAGGQDLFVRMSASELEAENNSKKVGILVAVIVTVSIATITAALILGWRYTQKGSKIKTDHSIKVDHEQSQGDDDMDLPFFDLLSIAAATCDFSMDNKIGEGGFGPVYKGKLKDGIEIAVKRLSEKSGQGLTEFKNEVKLIAKLQHRNLVRLLGCCLQGEEKMLVYEYMPNGSLDSFIFDENKGKLLDWSKRFNIILGIARGVIYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGMARIFGDQNEVNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLVLEIISGKRSRGYYNPNHSLNLIGHAWKLWKEGKPLELIDSSIQDSCSLSQILHCIRVSLLCVQQHPEDRPGMSCALLMFLSEIELPEPKQPGYFGNASVEAYSLGAKQELSSTNEITITLLEPR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4655g00006 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Pral4655g00006 812 ProSiteProfiles Bulb-type lectin domain profile. 18 138 IPR001480 -
Pral4655g00006 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 141 - -
Pral4655g00006 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Pral4655g00006 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 461 572 - -
Pral4655g00006 812 SUPERFAMILY Protein kinase-like (PK-like) 482 766 IPR011009 -
Pral4655g00006 812 CDD B_lectin 24 144 IPR001480 -
Pral4655g00006 812 Pfam PAN-like domain 335 401 IPR003609 -
Pral4655g00006 812 ProSiteProfiles PAN/Apple domain profile. 333 416 IPR003609 -
Pral4655g00006 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 332 415 - -
Pral4655g00006 812 SMART blect_4 24 144 IPR001480 -
Pral4655g00006 812 Pfam D-mannose binding lectin 66 170 IPR001480 -
Pral4655g00006 812 CDD PAN_AP_plant 330 414 - -
Pral4655g00006 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 757 - -
Pral4655g00006 812 ProSiteProfiles EGF-like domain profile. 278 314 IPR000742 -
Pral4655g00006 812 Pfam S-locus glycoprotein domain 202 312 IPR000858 GO:0048544
Pral4655g00006 812 Gene3D Phosphorylase Kinase; domain 1 470 572 - -
Pral4655g00006 812 Gene3D - 21 141 IPR036426 -
Pral4655g00006 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 775 - -
Pral4655g00006 812 CDD STKc_IRAK 503 761 - -
Pral4655g00006 812 Gene3D Transferase(Phosphotransferase) domain 1 573 775 - -
Pral4655g00006 812 SMART serkin_6 497 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4655g00006 812 Pfam Protein tyrosine and serine/threonine kinase 498 761 IPR001245 GO:0004672|GO:0006468
Pral4655g00006 812 SMART ntp_6 336 415 IPR003609 -
Pral4655g00006 812 ProSiteProfiles Protein kinase domain profile. 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4655g00006 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 175 IPR036426 -
Pral4655g00006 812 Pfam Domain of unknown function (DUF3403) 771 812 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4655g00006 Pral-Chr4655 20578 24787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4655g00006 431 781 Receptor kinase-like Gene Family AT4G23230 55.367 3.04e-127 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4655g00006 PK_Tyr_Ser-Thr 9.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4655g00006 - - gmx:100778155 1165.21