Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4654g00009 ATGGCGGAAGATCAATTTCAAGCCACTGGAAACTGGTGGGACTCAGCCAGAAACTCCAGGTTCGAAACTGAGGCTTCTCAATCTTCCTCCTCCATCCCCAACTTCGCTTGGCAACATACAGATATGTCGTCTCATCAAGACCTCAAGCCAAGGTCTTCCATGGCGGCTTCACCTTCTTCCTCCGACCCCAACCTGCATATGATGGGTTTAGGCCTCTCTTCCCAACCTCTGGACTGGAATCAACCCTCCTTTCTCCGAGGTGCAGAGAAAGGTGGGGAGAGCAGTTTCTTGAACGCATCAAGCACGAATTTTCAGCAAGAAAGTGCCATGGGGTTGTCTCAAGTTCAGTGGAGGGACAAGTTGTTTTCTGCTGAGTCGTCTTCTTCAACGAACGAGTTCAAACAAGTAAACCGGGGTTTCTCTTTAGATCAAACGCAGTTTAGTCCTCAATATAGTTCTGGGGAAAGTACTGTAACCACCCAAGGCTTAGCATCTAGTACTAACTTTCAGGTGGATTTTTATGGCAACTCATCCATATTACAAGGACTATTACCACCTGATCATAATAACAATAGTCAAGTCCAGTATGATCATCACCAGAATCGCCAGATAAACTTTCCATACCAAACAAGCTACGGATTGAACAGTAACGATCAGTTAATGCCTTCATGGTCTAATAAAGTTCCTCAATTTCTGCGAGCTTCACCTCCAAAACAACAACCACCCCATAATAACAATCAGTTGCATTTCACAAACAACGCTCCTTTCTGGAACGCTTCTGAGGCCTCAAATATTAAAGATGCTAGATCTGGCTTCTTTCCCTCTTTGCAACCTCCATTCCCTTCTCCAAGCTTCGATGTTCAATCCAAGAATATGTGTGAAGTTAGGGAGTCGAGTAGCGTGGTGAAGAAAAGTGGGAGCGAGGCAGCACCCAAAAGGCCTCGGAACGAAACACCGTCTCCTTTGCCAGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCGCTTCAACAATTGGTTTCGCCTTTCGGAAAGACCGATACAGCCTCGGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTTTTAAGCACACCGTATATGAAAAGTGGAGCTCCCATACAGCATCAACAGAGTCCTGGTAAATCTAAAGAAGGCGACGGTGGGAAGCAAGATCTGAGAAGCAGAGGTCTATGTCTGGTGCCGATGTCGAGTACGTTTCCAGTGACTCAAGAAACCGCAGTTGATTTTTGGACGCCAACATTCGGAGGAACGTTCAGATAA 1305 0.459 MAEDQFQATGNWWDSARNSRFETEASQSSSSIPNFAWQHTDMSSHQDLKPRSSMAASPSSSDPNLHMMGLGLSSQPLDWNQPSFLRGAEKGGESSFLNASSTNFQQESAMGLSQVQWRDKLFSAESSSSTNEFKQVNRGFSLDQTQFSPQYSSGESTVTTQGLASSTNFQVDFYGNSSILQGLLPPDHNNNSQVQYDHHQNRQINFPYQTSYGLNSNDQLMPSWSNKVPQFLRASPPKQQPPHNNNQLHFTNNAPFWNASEASNIKDARSGFFPSLQPPFPSPSFDVQSKNMCEVRESSSVVKKSGSEAAPKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVLSTPYMKSGAPIQHQQSPGKSKEGDGGKQDLRSRGLCLVPMSSTFPVTQETAVDFWTPTFGGTFR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4654g00009 434 SMART finulus 327 371 IPR011598 GO:0046983
Pral4654g00009 434 Gene3D - 326 372 IPR036638 GO:0046983
Pral4654g00009 434 FunFam Transcription factor bHLH123 family 326 386 - -
Pral4654g00009 434 MobiDBLite consensus disorder prediction 378 401 - -
Pral4654g00009 434 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 373 IPR036638 GO:0046983
Pral4654g00009 434 MobiDBLite consensus disorder prediction 296 325 - -
Pral4654g00009 434 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 316 365 IPR011598 GO:0046983
Pral4654g00009 434 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 102 415 - -
Pral4654g00009 434 MobiDBLite consensus disorder prediction 1 73 - -
Pral4654g00009 434 CDD bHLH_AtbHLH_like 322 369 IPR045239 -
Pral4654g00009 434 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4654g00009 Pral-Chr4654 74260 76985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4654g00009 248 434 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 65.657 1.61e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4654g00009 - - gmx:100778697 555.058