Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4654g00007 ATGGCGGAAGATCAATTTCAAGCCACTGGAAACTGGTGGGACTCAGCCAGAAACTCCAGGTTCGAAACTGAGGCTTCTCAATCTTCCTCCTCCATCCCCAACTTCGCTTGGCAACATACAGATATGTCGTCTCATCAAGACCTCAAGCCAAGGTCTTCCATGGCGGCTTCACCTTCTTCCTCCGACCCCAACCTGCATATGATGGGTTTAGGCCTCTCTTCCCAACCTCTGGACTGGAATCAACCCTCCTTTCTCCGAGGTGCAGAGAAAGGTGGGGAGAGCAGTTTCTTGAACGCATCAAGCACGAATTTTCAGCAAGAAAGTGCCATGGGGTTGTCTCAAGTTCAGTGGAGGGACAAGTTGTTTTCTGCTGAGTCGTCTTCTTCAACGAACGAGTTCAAACAAGTAAACCGGGGTTTCTCTTTAGATCAAACGCAGTTTAGTCCTCAATATAGTTCTGGGGAAAGTACTGTAACCACCCAAGGCTTAGCATCTAGTACTAACTTTCAGGTGGATTTTTATGGCAACTCATCCATATTACAAGGACTATTACCACCTGATCATAATAACAATAGTCAAGTCCAGTATGATCATCACCAGAATCGCCAGATAAACTTTCCATACCAAACAAGCTACGGATTGAACAGTAACGATCAGTTAATGCCTTCATGGTCTAATAAAGTTCCTCAATTTCTGCGAGCTTCACCTCCAAAACAACAACCACCCCATAATAACAATCAGTTGCATTTCACAAACAACGCTCCTTTCTGGAACGCTTCTGAGGCCTCAAATATTAAAGATGCTAGATCTGGCTTCTTTCCCTCTTTGCAACCTCCATTCCCTTCTCCAAGCTTCGATGTTCAATCCAAGAATATGTGTGAAGTTAGGGAGTCGAGTAGCGTGGTGAAGAAAAGTGGGAGCGAGGCAGCACCCAAAAGGCCTCGGAACGAAACACCGTCTCCTTTGCCAGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCGCTTCAACAATTGGTTTCGCCTTTCGGAAAGACCGATACAGCCTCGGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTGACAGTTTTAAGCACACCGTATATGAAAAGTGGAGCTCCCATACAGCATCAACAGAGTCCTGGTAAATCTAAAGAAGGCGACGGTGGGAAGCAAGATCTGAGAAGCAGAGGTCTATGTCTGGTGCCGATGTCGAGTACGTTTCCAGTGACTCAAGAAACCGCAGTTGATTTTTGGACGCCAACATTCGGAGGAACGTTCAGATAA 1311 0.4592 MAEDQFQATGNWWDSARNSRFETEASQSSSSIPNFAWQHTDMSSHQDLKPRSSMAASPSSSDPNLHMMGLGLSSQPLDWNQPSFLRGAEKGGESSFLNASSTNFQQESAMGLSQVQWRDKLFSAESSSSTNEFKQVNRGFSLDQTQFSPQYSSGESTVTTQGLASSTNFQVDFYGNSSILQGLLPPDHNNNSQVQYDHHQNRQINFPYQTSYGLNSNDQLMPSWSNKVPQFLRASPPKQQPPHNNNQLHFTNNAPFWNASEASNIKDARSGFFPSLQPPFPSPSFDVQSKNMCEVRESSSVVKKSGSEAAPKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSPGKSKEGDGGKQDLRSRGLCLVPMSSTFPVTQETAVDFWTPTFGGTFR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4654g00007 436 CDD bHLH_AtbHLH_like 322 373 IPR045239 -
Pral4654g00007 436 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 103 417 - -
Pral4654g00007 436 FunFam Transcription factor bHLH123 family 326 388 - -
Pral4654g00007 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 383 IPR036638 GO:0046983
Pral4654g00007 436 MobiDBLite consensus disorder prediction 380 403 - -
Pral4654g00007 436 SMART finulus 327 371 IPR011598 GO:0046983
Pral4654g00007 436 MobiDBLite consensus disorder prediction 296 325 - -
Pral4654g00007 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 316 365 IPR011598 GO:0046983
Pral4654g00007 436 MobiDBLite consensus disorder prediction 1 73 - -
Pral4654g00007 436 Gene3D - 326 386 IPR036638 GO:0046983
Pral4654g00007 436 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4654g00007 Pral-Chr4654 58733 76985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4654g00007 248 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 65.657 1.24e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4654g00007 - - gmx:100778697 561.992