Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4654g00005 ATGGACCTTCTTGCTCGCTTCACTATAGTTGCCTGTTTCCTTCTTCCTATCCTCCGGCCATCCCTTGCTCTTGATTCCCTTCCCGAGTTGCAGTTCATCAGGGACAATGGAACCACCTTGGTTTCAAAAGATGGAACCTTTGAACTTGGTTTCTTCACTCCTGGTACGTCTAACAGACATTACCTGGGTATTTGGTACAAGAACATCCCGGTTCAAACCGTTGTCTGGGTTGCAAACCGCCTCAACCCAATCAACGATTCATTTGCTACCTTAACCATGACCACTTCAGGTAATCTTGTCCTTTCCCATAACAACACTGTTCTTTGGTCTACAAATTCCACAACGCAAGCAGAGAGTCCAACCGCCCGCCTCTTGGATTCTGGAAATCTGGTGGTGATAGATGAGGCCGGAGCAGACCCAGAAGCATATTTATGGCAGAGCTTTGATTATCCATCTGATACGTTATTGCCAGGTATGAAATACGGATGGGACTTAAAAACAGGCAAGCAATGGTATTTAACAGCTTGGAAGAGCCCAGATGATCCGTCTCCTGGAGAATTTACTAGTGCTGTGGTGCTCCACAACTATCCGGATTCATATATAATGAAGGGAACCAAAAAATTTTACCGATTTGGACCTTGGAATGGCGTTCGCGGGAGTGGTGGTCCTGAAATAAAGCCCAACCCTGTTTTCGAATACACCTTCGTTGACAATAAGGATGGGTACTACTACATGGACCTTATCAATAATAATTCTGTCTTGACAAGATTGGTGTTAAACGAAACAGACTCTGCTCGGTATCGTTATGTATGGCTGGAAAATATCAAAACATGGCAAGTTTATTCGACGAAGCCAATAGATTACTGCGATACTTATGGCCTCTGTGGACCAAATGGGAATTGTATCATTACTGAATCGCCTGTATGCCGATGCTTAAATGGTTTCACGCCTAAGTCCCCACAACATTGGAATTCGGTGGACTGGACTGATGGATGTGTGCGAGATAAACCTCTTAACTGCTCCGACAAAGACAAACATGGTTTCATTAAATTGATGGGCATGAAGGTGCCGGACACTACGCTGTCTTGGCTTGATCGCACAATGAATCTAGAGCAATGCAGACGCAAGTGCTTGGAGAATTGTTCTTGCACGGCCTATACCAATTCAGAAATCAGAGGGGGAGGTAGTGGTTGTGCCTTATGGTTTGGTGATTTACTTGATGTCAGATATTATGCGTCTGGGGGGCAAGATCTATATGTTCGAATGGATGCTTCAGAATTAGAATCTGAAAATAAAAAGAAGGTGATAATGATCGTTACCATTACCATTGGTGTAATTTTTGGCGTACTTTTTGTTGGGGGCTGTATCTTCTGCAGAGTTCGCAGAAAGAGAAAAGCTAACATGGAAGATGTAAAAGATGATGTTCGAGGCGATGAGAATCCACAGGATGATCAAGATCTCCCCTTGTTCGATCTTGCAGCAATAGCAAATGCCACTAATAACTTCTCCAAGAAGAACAAACTTGGAGAGGGTGGCTTTGGACCTGTATATTGGGGGAAATTATTGAATGGACAAGAAATTGCAGTAAAGAGGCTTTCAATAAAATCAAGACAAGGATTGGCGGAGTTTAAAAATGAAGTAAAATTTATTGCAAAACTCCAACATCGGAATTTGGTGAAACTTCTCGGCTGCTGCATCCACGAGCAAGAAAAAATGTTGGTGTATGAATACTTGCCCAATAGAAGTTTGAACTCCTTCATTTTTGATGAAGCCAAAAGAGAGTTGTTAGATTGGTCTAGACGTTTCCACGTTATTATAGGAATTAGTAGAGGTCTTATGTATCTTCATCAAGATTCAAGATTGAGAATCATTCATAGAGATTTAAAAGCAAGTAACGTTTTACTTGATGACAAGTTCATTCCAAAAATATCAGATTTTGGGTTAGCTAAAACTTTTGAAGAAGAACAGACAGAAGGCAATACAAACAGAGTAGTGGGAACTTATGGATACATGGCACCAGAGTATGCTGCAGATGGATTATATTCAATGAAATCCGACGTCTTCAGTTATGGCATATTAGTGTTAGAAATTATATGTGGAAAGAAAAATAGAGGGTTTTATCTAGAAGACTCCAAGCACAACCTTATTGGTCATGCGTGGATACTGTGGAATGAAGGAAGGGTTCTAGAATTAATTGATAAGAACATAGAGGAGACCTGCAATGTATCAGAAGTATTAAGGTGCATTCATGTGAGCCTTTTGTGCGTGCAACAAAATCCAGAAGATAGACCCACCATAGCATCTGCAATTGTGATGTTGGAAAGTGAAATCGAACTTCCTAAGCCTAAACAGCCAGGTTTCTTTCATGGAATGGATTCAGTTCAACCTCACACTTCCAACTCAAGTCAGAAGGAACGAAGCTCAACCAATGAAATGACAGTGACCTTACTTCAAGCCAGACTCCTCGGCTTCATTCCACTTTTCATGGGCCTTCTTCCTTCCTTGAGTATCTTCATCCTTTTCATTCTTCCCTATTTCAAGCCTTCCACAGCAGAGGATTCCCTTCGTGGGTCCGAGTCCCTCAGGGACAATGGAACCACCTTGGTTTCGAAAGATGGAACCTTTGAACTTGGTTTCTTCACTCCTGGTACTTCCAACAAACGTTACCTTGGCATTTGGTACAAGAACATCCCGGTTCAAACCGTTGTCTGGGTTGCAAACCGCCTCAACCCAATCAATGATTCATCTGTTGCCTTGACTATGACCACTTCCGGCAACCTTGTTCTGTCCCAAAACAACACTGTTCTTTGGTCAACAAACTCCACTGCAAAAGCACAGAGTCCAACCGCACGGCTCTTGGATTCTGGAAATCTTGTGGTGATGGATAAGAGCGGAGAAGACCCAGATGCTTATTCATGGCAAAGCTTTGACTATCCTTCTGATACGTTATTGCCAGGCATGAAATATGGATGGGACTTGAAAACTGGTAGGCAATGGTATTTAACGGCTTGGAAGAGGCCAGATGATCCATCTCCCGGTGATTTAACTAGCGTTGAAGTGCTCCATGGCTATCCCGATTCGTATTTGATGAAGGGGAACAAAAGATTCTATCGATTTGGACCATGGAATGGCTTTCATGGGAGTGGTGGTCCTGAAATAAAGCCCAACCCTGTTTTCGACTTCATCTTTGTCGACAATAAGGATGGCATCTATTACATGGACCTTTTGAATAACAATTCTATATTGACAAGATTGGTGTTGAACCAAACACAATCTGCTCGGTATCGTTATGTATGGCTGGAAACTGCAAAAACATGGCAGGTTTATTCCACCAAGCCTGTAGATTACTGTGATACCTATGGCCTCTGTGGACCAAATGGGAATTGTATTATTACTGAATCGCCGGTGTGCGAATGCTTGGGAGGCTTCACCCCTAAGTCGCCACAAAACTGGAATTCGGTGGACTGGGCAGACGGGTGTGTTCGAAAGAAACCTCTGAATTGCTCAGAAAGAGACAAAGATGGGTTCATTAAATTCAAAGGCTTGAAGGTGCCAGACACTACGTTTTCTTGGCTTGACAGGACAATGAATCTAGAGCAATGCAAAAGGAAGTGCTTGGAGAATTGTTCTTGCACGGCCTATACTAATTCAGATATCAGAGGGGGAGGTAGTGGTTGTGCCTTATGGTTTGGTGATCTAATTGATGTCAGATATTATGCGTCTGGGGGGCAAGATTTATATGTTCGAATGGATGCTTCAGAATTAAAATCTGGGAATAAAAAGAAGTTGATAATGATCGTTACTATCACCTTTGGTGCAACTTTTGGTCTGCTTTTAGTTGGGGGCTATATCATCTACAGAGTCCGCAGAAACAGAACTGCTAAATCAAAAGATGTGAGAGATGATATTCCATACGGTGAGAGTCCAGAGGATGATCTAGATCTCCCCTTGTTTGATCCGGCAACAGTAACAAGCGCCACTGATAACTTCTCCGCCAAGAATAAGATCGGAGAAGGTGGATTTGGACCTGTTTATTGGGGAAAATTATTGAATGGACAAGAAATTGCTGTGAAGAGGCTTTCAATAAAATCAAGGCAAGGGTTGGTGGAGTTTAAAAATGAAGTAAAATTTATTGCAAAACTCCAACATCGAAATCTGGTGAAACTTCTCGGCTGTTGCATCCATGAGCAAGAAAAAATGTTGGTGTATGAATACATGCCAAATAAAAGTTTGAACTTCTTCATTTTTGATGAAAGCAAAGGAGAGTTATTAGATTGGTCTAAGCGGTTCAATATTATTTTGGGAATTGGTAGAGGTCTCATGTATCTTCATCAAGATTCAAGACTAAGAATTATTCATAGAGATCTAAAAACAAGTAACATTTTACTTGATGACAAGTTGATCCCGAAAATATCAGATTTTGGGTTGGCTAAAACTTTTGGAGAAGAACAAACAGAAGGAAATACAAATAGAGTAGTTGGAACATATGGATACATGGCACCCGAATACGCTGCAGATGGGCTATATTCAATGAAATCTGATGTTTTTAGTTATGGCGTATTGGTATTGGAGATTATATGTGGAAAGAAAAATAGGGGCTTTTATCTAGAGGACTCCAAACACAACCTTACTGCTTATGCATGGATACAGTGGAAAGAAGGAAGGTCGTTAGAATTGATTGATAAGAACATAGAGGAAACTTGCAATGTGTCAGAAATATTAAGATGCATTCATGTGAGCTTATTGTGTGTGCAGCAACATCCAGAAGATAGGCCTACAATAGCATCTGCAGTTCTGATGTTGGAAAGTGAAGCTGAACTTCCTGAGCCTAAACAGCCAGGTTTCTTTCATGGGAAGGATTCAATTCAACCACACACTTCCAGTTCAAGTCAAAAGCAACGTAGCTCAACCAATGAAGTCACAATAAGCTTACTTGAAGCCAGATGA 4947 0.415 MDLLARFTIVACFLLPILRPSLALDSLPELQFIRDNGTTLVSKDGTFELGFFTPGTSNRHYLGIWYKNIPVQTVVWVANRLNPINDSFATLTMTTSGNLVLSHNNTVLWSTNSTTQAESPTARLLDSGNLVVIDEAGADPEAYLWQSFDYPSDTLLPGMKYGWDLKTGKQWYLTAWKSPDDPSPGEFTSAVVLHNYPDSYIMKGTKKFYRFGPWNGVRGSGGPEIKPNPVFEYTFVDNKDGYYYMDLINNNSVLTRLVLNETDSARYRYVWLENIKTWQVYSTKPIDYCDTYGLCGPNGNCIITESPVCRCLNGFTPKSPQHWNSVDWTDGCVRDKPLNCSDKDKHGFIKLMGMKVPDTTLSWLDRTMNLEQCRRKCLENCSCTAYTNSEIRGGGSGCALWFGDLLDVRYYASGGQDLYVRMDASELESENKKKVIMIVTITIGVIFGVLFVGGCIFCRVRRKRKANMEDVKDDVRGDENPQDDQDLPLFDLAAIANATNNFSKKNKLGEGGFGPVYWGKLLNGQEIAVKRLSIKSRQGLAEFKNEVKFIAKLQHRNLVKLLGCCIHEQEKMLVYEYLPNRSLNSFIFDEAKRELLDWSRRFHVIIGISRGLMYLHQDSRLRIIHRDLKASNVLLDDKFIPKISDFGLAKTFEEEQTEGNTNRVVGTYGYMAPEYAADGLYSMKSDVFSYGILVLEIICGKKNRGFYLEDSKHNLIGHAWILWNEGRVLELIDKNIEETCNVSEVLRCIHVSLLCVQQNPEDRPTIASAIVMLESEIELPKPKQPGFFHGMDSVQPHTSNSSQKERSSTNEMTVTLLQARLLGFIPLFMGLLPSLSIFILFILPYFKPSTAEDSLRGSESLRDNGTTLVSKDGTFELGFFTPGTSNKRYLGIWYKNIPVQTVVWVANRLNPINDSSVALTMTTSGNLVLSQNNTVLWSTNSTAKAQSPTARLLDSGNLVVMDKSGEDPDAYSWQSFDYPSDTLLPGMKYGWDLKTGRQWYLTAWKRPDDPSPGDLTSVEVLHGYPDSYLMKGNKRFYRFGPWNGFHGSGGPEIKPNPVFDFIFVDNKDGIYYMDLLNNNSILTRLVLNQTQSARYRYVWLETAKTWQVYSTKPVDYCDTYGLCGPNGNCIITESPVCECLGGFTPKSPQNWNSVDWADGCVRKKPLNCSERDKDGFIKFKGLKVPDTTFSWLDRTMNLEQCKRKCLENCSCTAYTNSDIRGGGSGCALWFGDLIDVRYYASGGQDLYVRMDASELKSGNKKKLIMIVTITFGATFGLLLVGGYIIYRVRRNRTAKSKDVRDDIPYGESPEDDLDLPLFDPATVTSATDNFSAKNKIGEGGFGPVYWGKLLNGQEIAVKRLSIKSRQGLVEFKNEVKFIAKLQHRNLVKLLGCCIHEQEKMLVYEYMPNKSLNFFIFDESKGELLDWSKRFNIILGIGRGLMYLHQDSRLRIIHRDLKTSNILLDDKLIPKISDFGLAKTFGEEQTEGNTNRVVGTYGYMAPEYAADGLYSMKSDVFSYGVLVLEIICGKKNRGFYLEDSKHNLTAYAWIQWKEGRSLELIDKNIEETCNVSEILRCIHVSLLCVQQHPEDRPTIASAVLMLESEAELPEPKQPGFFHGKDSIQPHTSSSSQKQRSSTNEVTISLLEAR 1648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4654g00005 1648 MobiDBLite consensus disorder prediction 793 809 - -
Pral4654g00005 1648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1406 1609 - -
Pral4654g00005 1648 Pfam S-locus glycoprotein domain 1037 1147 IPR000858 GO:0048544
Pral4654g00005 1648 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Pral4654g00005 1648 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pral4654g00005 1648 Gene3D Transferase(Phosphotransferase) domain 1 1406 1612 - -
Pral4654g00005 1648 Gene3D Transferase(Phosphotransferase) domain 1 578 783 - -
Pral4654g00005 1648 ProSiteProfiles PAN/Apple domain profile. 1168 1251 IPR003609 -
Pral4654g00005 1648 Gene3D Phosphorylase Kinase; domain 1 1307 1405 - -
Pral4654g00005 1648 SMART blect_4 859 979 IPR001480 -
Pral4654g00005 1648 SMART blect_4 31 151 IPR001480 -
Pral4654g00005 1648 CDD EGF_CA 1114 1147 - -
Pral4654g00005 1648 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 764 - -
Pral4654g00005 1648 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Pral4654g00005 1648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 848 976 - -
Pral4654g00005 1648 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Pral4654g00005 1648 CDD STKc_IRAK 1336 1602 - -
Pral4654g00005 1648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Pral4654g00005 1648 ProSiteProfiles EGF-like domain profile. 1113 1149 IPR000742 -
Pral4654g00005 1648 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00005 1648 ProSiteProfiles Bulb-type lectin domain profile. 852 973 IPR001480 -
Pral4654g00005 1648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pral4654g00005 1648 SUPERFAMILY Protein kinase-like (PK-like) 1314 1622 IPR011009 -
Pral4654g00005 1648 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00005 1648 SMART serkin_6 1330 1601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00005 1648 Pfam Domain of unknown function (DUF3403) 1604 1648 IPR021820 GO:0004674
Pral4654g00005 1648 Pfam Domain of unknown function (DUF3403) 777 820 IPR021820 GO:0004674
Pral4654g00005 1648 CDD B_lectin 36 151 IPR001480 -
Pral4654g00005 1648 Pfam D-mannose binding lectin 901 1005 IPR001480 -
Pral4654g00005 1648 Pfam D-mannose binding lectin 73 177 IPR001480 -
Pral4654g00005 1648 MobiDBLite consensus disorder prediction 1609 1648 - -
Pral4654g00005 1648 SMART ntp_6 1171 1250 IPR003609 -
Pral4654g00005 1648 SMART ntp_6 343 422 IPR003609 -
Pral4654g00005 1648 MobiDBLite consensus disorder prediction 788 809 - -
Pral4654g00005 1648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1294 1405 - -
Pral4654g00005 1648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1167 1250 - -
Pral4654g00005 1648 SMART egf_5 1116 1161 IPR000742 -
Pral4654g00005 1648 SMART egf_5 288 333 IPR000742 -
Pral4654g00005 1648 CDD PAN_AP_plant 1165 1249 - -
Pral4654g00005 1648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1451 1463 IPR008271 GO:0004672|GO:0006468
Pral4654g00005 1648 Pfam PAN-like domain 1168 1236 IPR003609 -
Pral4654g00005 1648 Pfam PAN-like domain 340 408 IPR003609 -
Pral4654g00005 1648 CDD EGF_CA 286 319 - -
Pral4654g00005 1648 FunFam Os04g0303100 protein 892 1036 - -
Pral4654g00005 1648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Pral4654g00005 1648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 577 - -
Pral4654g00005 1648 Gene3D Phosphorylase Kinase; domain 1 464 577 - -
Pral4654g00005 1648 SUPERFAMILY Protein kinase-like (PK-like) 486 800 IPR011009 -
Pral4654g00005 1648 CDD PAN_AP_plant 337 421 - -
Pral4654g00005 1648 Pfam Protein kinase domain 1331 1598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00005 1648 ProSiteProfiles Protein kinase domain profile. 1330 1615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00005 1648 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Pral4654g00005 1648 SUPERFAMILY alpha-D-mannose-specific plant lectins 902 1010 IPR036426 -
Pral4654g00005 1648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 422 - -
Pral4654g00005 1648 MobiDBLite consensus disorder prediction 1621 1648 - -
Pral4654g00005 1648 FunFam Os04g0303100 protein 64 208 - -
Pral4654g00005 1648 CDD B_lectin 864 979 IPR001480 -
Pral4654g00005 1648 Pfam Protein tyrosine and serine/threonine kinase 504 769 IPR001245 GO:0004672|GO:0006468
Pral4654g00005 1648 Gene3D - 848 976 IPR036426 -
Pral4654g00005 1648 Gene3D - 22 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4654g00005 Pral-Chr4654 30621 39756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4654g00005 428 787 Receptor kinase-like Gene Family AT4G23230 53.463 2.20e-118 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4654g00005 Pkinase 8.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4654g00005 - - tcc:18593897 1898.63