Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4654g00004 ATGAGCAGCCCAACATGTATAAGAAAGGTCGAGCAAAATAACTTTTCCTCCTTCGATTTCCCTCGACTTTCAATGGACCTTCTTGGTTCGTTGAGCATCTTTGCTTGTGTTCTTCTTCACATCCTCCAGCTTTCCATTGCAGCTGATTATCTTCGTGAGTCGCAGTTCATCAAGGACGATGGAACCACGTTGGTTTCAAAAGGTGGAACCTTTGAACTCGGTTTCTTCACTCCTGGTACTTCCAACAAACGCTACCTTGGTATTTGGTACAAGAATATCCCGGTTCAAACCGTTGTCTGGGTTGCAAACCGCATCAACCCAATCAACGATTCCACTGTTACCTTAACTATGGCCACTTCCGGCAATCTTGTCCTGTCCCAGAACAGCACTATTCTTTGGTCAACAAATTCCACGGCTCAGGCACAGAGTCCCACCTCCCGGCTCTTGGATTCTGGGAATCTTGTAGTGATCGATGAGAATGCAGGAAAGCCAGAAGCTTACTTATGGCAAAGCTTTGATCATCCGTCTGATACGTTATTGCCAGGTATGAAATATGGATGGGACTTAAGAAATGGTTGGGCGTGGTCTTTAACAGCTTGGAAGAGCCCGGATGATCCATCTCCTGGAGATTTTACCAACATTTTAATGCTTCATAACTACCCCGATTCGTATATAATGAAGGGAACCAACAAATTTTACCGATTTGGACCGTGGAATGGCTTGCGAGGGAGTGGTTCTCCCGAAGTGAAGACCAACCCTGTTTTCGAATACACCTTTGTTGACGATGGGGACGAGAACTACTTCATGTTCAACCTCAAAAATAGTTCTGTATTAACAAGACTGGTATTGAACCAAACAGATTCTGCTCGCTATCGTTATGTATGGCTGGAAACTGAGAAAAAATGGACTATTTACTCGAAAAAGCCAGTAGACTTCTGCGACACCTATGGCCTCTGTGGAGCAAATGGGAACTGCATAATTACTGAATCTCCAGTGTGCCACTGTTTAAAAGGGTTCAACCCTAAGTCACCACAACATTGGAATTCGGCGGATTGGTCTGGTGGGTGTGTGCGAAATAAACCTCTGAACTGCTCTGAAAAACACAAACATGGGTTCGTTAAATTCACGGGCTTGAAGGCACCCGACACGACGCAAACTTGGCTGGATGTGACAATGAATCTAGAGCAATGTAGACAAAAGTGCTTGGAAAATTGTTCTTGCACGGCTTTTGCTAATTCAGATGTCAGAGGCGCAGGTAGTGGTTGTGCTTTATGGTTTTGTGAACTAACTGATATCAGATATTATGCATCTGGGGGACAGGATCTGTACATTCGAATGGATGCTTCAGAATTAGAATCTGGGAAAAAAAAGAAGTTGATAATGATCGTTATTATCGCCATTGGTGCAAGTTTTGGAATGCTTTTAGTTGGGGGCTATATCATCTACAGAGTCCGCAGAAACAGGACTGAGAAATTAAAAAATATAGAAGTTCAAATTCAAAACGATGACGCTAACGATGCAGATCTCCCAATATTTGATCTGCCAACAATAGCAAGAGCCACTGATAATTTCTCGGAGAAGAACAAAATTGGGCAAGGTGGATTTGGACATGTATACTGGGGAAAATTATCAAATGGGCGAGAAATTGCTGTGAAAAGACTATCAAGAAAATCAAGACAAGGATTGACTGAGTTTAAAACTGAAGTGAAGTTTATTGTGAAACTACAGCATCGAAATCTTGTAAAACTTATTGGCTGTTGCATTCACGAACAAGAAAAAATGTTGGTGTATGAATATATGCCAAACAAAAGTTTGAATTCCTTCATTTTCGATGAAAGTAGAGGAGAGTTGTTAGATTGGTCGAAACGCTTTGGTATTATTATGGGGATTGGTCGAGGACTTGTGTATCTTCATCAAGATTCAAGACTACGAATTATTCATAGAGATTTAAAAGCAAGTAACATTTTGCTTGATGATAAGTTAATCCCCAAAATATCAGATTTTGGATTGGCAAAAACTTTTGAAGATGAGGAGATAGAAGGCAATACAAAAAGAGTAGTAGGGACTTACGGGTATATGGCACCAGAATATGCTGCTGATGGGTTGTACTCAATAAAATCTGATGTATTTAGCTATGGGATATTAGTGCTGGAGGTTATATGTGGGAAGAAAAATAGAGGATTTTATGTTGAAGAATCCAAACATAACCTTATTGGTTTTGCATGGATGCAGTGGAAGAAAGGGAGGGCTTTAGAATTGGTTGACAAAAACATAAAGGACGAATTATGTAATGAATCAGAAGTATTAAGGTGCCTTCATGTGAGTCTATTATGTGTGCAGCACAATGCAGAGGATAGACCCACCATAGCATCTGCAATTTTGATGTTGGAAAGTGAGATTGAACTTCCTGAACCTAAACAACCAGGATTCTTTAATGGCAACGATTCATTCCAACCACATAGTTCAGACTCAAATCAGAAGGAACACAGCTCAACCAATGAAATGACAGTTTCCTTACTTGTAGCCAGATGA 2532 0.408 MSSPTCIRKVEQNNFSSFDFPRLSMDLLGSLSIFACVLLHILQLSIAADYLRESQFIKDDGTTLVSKGGTFELGFFTPGTSNKRYLGIWYKNIPVQTVVWVANRINPINDSTVTLTMATSGNLVLSQNSTILWSTNSTAQAQSPTSRLLDSGNLVVIDENAGKPEAYLWQSFDHPSDTLLPGMKYGWDLRNGWAWSLTAWKSPDDPSPGDFTNILMLHNYPDSYIMKGTNKFYRFGPWNGLRGSGSPEVKTNPVFEYTFVDDGDENYFMFNLKNSSVLTRLVLNQTDSARYRYVWLETEKKWTIYSKKPVDFCDTYGLCGANGNCIITESPVCHCLKGFNPKSPQHWNSADWSGGCVRNKPLNCSEKHKHGFVKFTGLKAPDTTQTWLDVTMNLEQCRQKCLENCSCTAFANSDVRGAGSGCALWFCELTDIRYYASGGQDLYIRMDASELESGKKKKLIMIVIIAIGASFGMLLVGGYIIYRVRRNRTEKLKNIEVQIQNDDANDADLPIFDLPTIARATDNFSEKNKIGQGGFGHVYWGKLSNGREIAVKRLSRKSRQGLTEFKTEVKFIVKLQHRNLVKLIGCCIHEQEKMLVYEYMPNKSLNSFIFDESRGELLDWSKRFGIIMGIGRGLVYLHQDSRLRIIHRDLKASNILLDDKLIPKISDFGLAKTFEDEEIEGNTKRVVGTYGYMAPEYAADGLYSIKSDVFSYGILVLEVICGKKNRGFYVEESKHNLIGFAWMQWKKGRALELVDKNIKDELCNESEVLRCLHVSLLCVQHNAEDRPTIASAILMLESEIELPEPKQPGFFNGNDSFQPHSSDSNQKEHSSTNEMTVSLLVAR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4654g00004 843 MobiDBLite consensus disorder prediction 811 843 - -
Pral4654g00004 843 ProSiteProfiles Protein kinase domain profile. 524 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00004 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 98 206 IPR036426 -
Pral4654g00004 843 CDD PAN_AP_plant 361 445 - -
Pral4654g00004 843 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Pral4654g00004 843 SUPERFAMILY Protein kinase-like (PK-like) 509 796 IPR011009 -
Pral4654g00004 843 SMART blect_4 55 175 IPR001480 -
Pral4654g00004 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 44 172 - -
Pral4654g00004 843 ProSiteProfiles Bulb-type lectin domain profile. 48 169 IPR001480 -
Pral4654g00004 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Pral4654g00004 843 Gene3D Transferase(Phosphotransferase) domain 1 600 806 - -
Pral4654g00004 843 ProSiteProfiles PAN/Apple domain profile. 364 447 IPR003609 -
Pral4654g00004 843 SMART ntp_6 367 446 IPR003609 -
Pral4654g00004 843 Pfam D-mannose binding lectin 97 201 IPR001480 -
Pral4654g00004 843 Gene3D Phosphorylase Kinase; domain 1 498 599 - -
Pral4654g00004 843 Pfam Domain of unknown function (DUF3403) 800 843 IPR021820 GO:0004674
Pral4654g00004 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 600 804 - -
Pral4654g00004 843 Pfam Protein tyrosine and serine/threonine kinase 527 791 IPR001245 GO:0004672|GO:0006468
Pral4654g00004 843 CDD B_lectin 60 175 IPR001480 -
Pral4654g00004 843 SMART serkin_6 524 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00004 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 36 787 - -
Pral4654g00004 843 Pfam PAN-like domain 364 432 IPR003609 -
Pral4654g00004 843 ProSiteProfiles EGF-like domain profile. 309 345 IPR000742 -
Pral4654g00004 843 PIRSF SRK 21 843 IPR024171 GO:0004674
Pral4654g00004 843 Gene3D - 43 172 IPR036426 -
Pral4654g00004 843 Pfam S-locus glycoprotein domain 233 343 IPR000858 GO:0048544
Pral4654g00004 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 488 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4654g00004 Pral-Chr4654 22918 27237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4654g00004 459 810 Receptor kinase-like Gene Family AT4G23230 51.841 2.54e-119 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4654g00004 PK_Tyr_Ser-Thr 6.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4654g00004 - - pcin:129316778 1307.74