Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4654g00003 ATGGATATTGTTCATTTCATTACTGTTGTTGTTTCCATACTTATCTCTTCTTTACAAGCTTCTGGGGCAGTTGATTCCATCCTTCAGCCCAATTCCTTAATGACTGATGGCATGACATTAGTGTCCAAAGGTGGAAGCTTTGAACTTGGCTTCTTCAGTCCTAGAAGCTCTGGTAAACACTATCTGGGAATTTGGTACAAGAACGTCCCCATTCAGACAGTTGTTTGGGTAGCAAACAGAGACAAATCAATCAATGGTTCCTCTGTCACTGCTAAATTAATGCTCAACAGCACAGGCAACCTCGTCCTGGCCCAAGATGACACTATTATTTGGAATTCAACTTCTCTGAAACAAGTGCAGAATCCAGTGGCTGAGCTCTTGGATTCTGGAAATCTTGTGGTTCGAGATGAGAAGGACGATGATCCAGAAGCATATTTGTGGCAAAGCTTTGACTACCCAAGTGACACACTGCTCTCGGGGATGAAATTGGGATATGACCTGAGAACAGGTTTGAATAGACGTCTAACAGCCTGGAGGACTCCGGAAGATCCATCTCCAAGTGACTTTTATCTAACTCTAGCCCCCCGTGACTATCCTGAATTTTATATAATGAAAGAAGGTTCAAAGTTCTTCAGAAATGGACCATGGAATGGCGTGGGACTTAGTGGCTCACCAGAACTGAAAGAGAATTACATTTTCGATTTTGAGTTCGTATCCACAAGAAATGAGGCTTTCTATCGGTACACCCTCAAGAATAGTTCTATAATCTCAAGGTATACGATCAACCTAACTGAGCAAGCAGATATTCGCTATGTGTGGTTGAAAGGTGATGAAAATTGGAAGCTTTATGCTAAAAAGCCTAGTGATTACTGTGACCAATATAAGCTGTGCGGGCCCAATGGGAAATGTGTCATTACTGAATCACCCCCCTGTCAATGCCTTAAAGGGTTCGTGCCTAAGTCACCACAGAAATGGAACTCAGTGGACTGGTCCGATGGATGTGTCCGCAATAAACCTCTAAACTGCTCTGAAAAATACGCAGACAAGTTTATGAAAATGGAAGGGTTGAAATTGCCGGAAACTACAAATTCTTGGCTTGATGAGACAATGAACCTAGTGCAATGCAGAGAGAAGTGCTTGGATAATTGTTCTTGCATGGCCTACACTAATTCAGATATCAGAGGGGCAGGCAGTGGTTGCGTCTTGTGGTTTGGTGATCTAATTGATATCAAGTATTATGCATCAGGAGGACAGGTTTTGTATGTTCGAATGCCTGCTTCAGAATTAGAACCTGGGAGAAATAAAAAGTTGATAATGATCGTTGCCATCACCATTGCTGTGATTTTATGCATTCTTTTAGTTGGGAGCTATTTCATTTACAGAGTCTGCAGGAAGAGGATTGAGAAATCAAGAAATGCAGGAGTTGAAATTCAAAACAATGAAAGAGATGATCTAGATCTCCCACTGTTCGATCTTCCAACAATAGCACAAGCCACTGAAAATCTTTCAGAGAAGAACAAAATCGGAGAAGGTGGATTTGGACCTGTATATTGGGGAAAGTTACTAAATGGACAAGAAATTGCTGTGAAGAAGCTTTCAAGAAGATCAGAACTTGGATTGATTGAATTCAAAAATGAAGTAAAATTTATAGCCAAACTCCAACATCGAAATCTAGTAAAACTTCTTGGCTGTTGCATTCATGAACACGAAAAGTTGTTGGTATATGAGTACATGCCAAATAGAAGTTTGGACTCCTTCATTTTTGATGAAACCAAAAGGAAATTGTTGGACTGGTTTAAGCGCTTCCACATTATTATGGGTATTGGTCGAGGTCTTTTATATCTTCATCAAGATTCAAGGTTACGAATCATTCATAGAGATTTGAAAACAAGTAACATTTTACTTGATGATAAGTTGATTCCAAAAATATCAGATTTTGGGTTAGCTAAAACTTTTGGAGAAGAGGAAAAAGAAGGCAGTACAAAGAGAGTAGTGGGCACTTATGGATACATGGCTCCTGAATACGCAGCAGATGGGCTATATTCAGTGAAATCCGATGTTTTTAGTTATGGTATATTAATGCTAGAAATTATTAGTGGAAAGAAAAACAGAGGATTTTATCTAGAAGACTCAACACACAATCTTGCTAGTCATGCATGGTTACTATGGAAAGAAGGAAAAGTTTTAGAATTGCTTGACAAGAACATGCAGGAACTGTGCAATGTATCAGAAGTAGTAAGGTGCATTCATGTGAGTCTGTTGTGTGTGCAACAAAATCCAGATGATAGACCCACCATAGCATCTGCAATTTTGATGTTGGAAAGTGAAGTGGCACTCCCTGAACCTAAACAGCCTGGTTTCTTTCCTGGCGTGGGCTCACTCAAGGAGCATACTTCTAGCCCAAATCAGAAGGAATGCAGCTCAACCAATAAATTTTTCTGCAACAAGAGGAATTTAGCTTGTATTGGCCTTCCCTATAGACTCTACAATTCCATGGACATTGTTTCTTTCATCACTACCGTTGTTTCCATACTTGTCCCTTCTTTCCAAGCTTCTGTGGCAGAAAGTTCCATCCTTCAGTCTAATTCCCCAATGAGTGATAGCACGAGAATATTTTCTAAAGGTGGAAGCTTCGAACTTGGCTTCTTCACTCCTGGAAACTCCGGTAAACAGTATCTGGGGATTTGGTACAGAAGCATCCCAATTCAGACAGTTGTTTGGGTAGCAAACAGAGATAACCCGATCAATGGTTCATCTACCACTGCTACTTTAACACTCAACAGCACAGGTAGTCTTGTCCTCACCCAAAATGATAGTGTTATTTGGTACTCAACTCCTCTGAAACCAGTACAGAATTCAGTGGCTGAGCTCCTAGATTCGGGAAACCTTGTGGTACGACATGAGAGAGGCCAGAACTCAGAAGCCTATTTGTGGCAAAGCTTCGACTATCCGACTGACACACTGCTCTCGGGGATGAAATTGGGATGCGACCTAAGAACAGGTTTAAATAGACGTCTAACATCTTGGAAGACTCCAGAAGATCCATCTCCTGGTGATTTTTCTATAACTGTCGACCCTCGTAATCATCCTGAATTATATATACTGAGAGGAAAATCAAAGTTCTTCAGAACTGGACCTTGGAATGGCGTGGGATTTGGTGGCTCCCCGGAACTGAAACAAAATCCTATTTTTGATTTTGGGTTCGTATCAACTAGAGATGAGATATACTATTATTGGCACAGCCTCAAGAATAGTTCTGTTATCTCAAGGTATGTGATCAACCAAACTGAGGAGGCTCGAATTCGATATGTGTGGACGAAAGGTGAGGAAAATTGGAAGAGTTATACTAAAAAGCCTAGTGACAATTGTGATCAATATAAGTGGTGTGGACCTAATGGGGAATGTGTTATCACTGGATCACCCCCATGCCAATGCCTAAAAGGGTTCACCCCCAAGTCACCTCAGAAATGGAACTCAGTGGACTGGTCTGATGGATGTGTCCGCAATAAACCTCTGAACTGCTCTGAAAATGGCACAGACAAATTTATAAAATTGGAAGGATTAAAAGTGCCTGAAACTACAGACGCTTGGCTTGACAAGGCAATGAACCTAGAGCAATGCAGAGAGAAGTGCTTGGAAAATTGTTCTTGCATGGCCTATACTAATTCAGATATTAGAGGGGGAGGTAGTGGTTGTGCCTTATGGTTTGGTGATCTAAATGATATCAGATCTTATGCATCTGGAGGACAGGATCTGTATGTTCGAATGCCTGCTTCAGAATTAGAATCTGGGAACAATAAAAAGTTGATAATGATCGTTGCCATCGCCGTTGCTGTGATTTTATGCATGCTTTTAGTGGGGGGCTATCTCATTTGTAAAGTCTACAGGAAGAGGATTGAGAAATCAAAAAATGCAGAAGTTGAGATTCAAAACAATGAAAGAGAAGATCTAGATCTCCCACTGTTTGACCTTCCAATAATAGAACAAGCCACCGAAAATTTTTCAGAGAAGAACAAAATCGGACAAGGTGGATTTGGACCTGTATATTGGGGAAAGTTATTAAATGAACAAGAAATTGCTGTGAAGAAGCTTTCAAGAAGATCGGAACTAGGATTGATTGAATTCAAGAATGAAGTAAAATTTATTGCCAAACTCCAACATCGAAATCTAGTAAAACTTCTTGGCTGCTGCATCCATGAACAAGAAAAGTTGTTGGTATATGAGTACATGTCAAATAGAAGTTTGGACTCCTTCATTTTTGATGAAACCAAAAGGAAATTGTTGGATTGGTTTGAGCGCTTTCACGTTATTATGGGTATTGGACGGGGTCTTTTATATCTTCATCAAGATTCAAGGTTACGGATAATTCATAGAGATTTGAAGGCAAGTAATATTTTACTTGATGACAAGTTAATCCCAAAAATATCAGATTTTGGGCTAGCAAAAACTTTTGGAGAAGAGGAAAAAGAAGGTATTACAAAGAGAGTAGTGGGCACTTATGGGTACATGGCTCCTGAATACGCAGCAGATGGGCTATATTCAGTGAAATCTGATGTTTTTAGTTATGGTATATTAATGCTAGAGATTATTAGTGGAAAGAAAAACAGAGGATTTTATCTAGAAGACTCAACACACAATCTTGCTAGTCATGCATGGTTACTATGGAAAGAAGGAAAAGTTTTAGAATTGCTTGACAAGAACATGCAGGAACTGTGCAATGTGTCAGAAGTAGTAAGGTGCATTCATGTGAGTCTGTTGTGTGTGCAACAAAATCCAGATGATAGACCCACCATAGCATCTGCAATTTTGATGTTGGAAAGTGAAGTGGCACTCCCTGAACCTAAACAGCCTGGTTTCTTTCATGGCATGGGCTCAATCAAAGGGCATACTTCTAGCTCATCAGGTCAGAAGGAATGCAGCTCAACCAATGAAATGACAGTGAGTTTACTTGATGCCAGATGA 4962 0.4015 MDIVHFITVVVSILISSLQASGAVDSILQPNSLMTDGMTLVSKGGSFELGFFSPRSSGKHYLGIWYKNVPIQTVVWVANRDKSINGSSVTAKLMLNSTGNLVLAQDDTIIWNSTSLKQVQNPVAELLDSGNLVVRDEKDDDPEAYLWQSFDYPSDTLLSGMKLGYDLRTGLNRRLTAWRTPEDPSPSDFYLTLAPRDYPEFYIMKEGSKFFRNGPWNGVGLSGSPELKENYIFDFEFVSTRNEAFYRYTLKNSSIISRYTINLTEQADIRYVWLKGDENWKLYAKKPSDYCDQYKLCGPNGKCVITESPPCQCLKGFVPKSPQKWNSVDWSDGCVRNKPLNCSEKYADKFMKMEGLKLPETTNSWLDETMNLVQCREKCLDNCSCMAYTNSDIRGAGSGCVLWFGDLIDIKYYASGGQVLYVRMPASELEPGRNKKLIMIVAITIAVILCILLVGSYFIYRVCRKRIEKSRNAGVEIQNNERDDLDLPLFDLPTIAQATENLSEKNKIGEGGFGPVYWGKLLNGQEIAVKKLSRRSELGLIEFKNEVKFIAKLQHRNLVKLLGCCIHEHEKLLVYEYMPNRSLDSFIFDETKRKLLDWFKRFHIIMGIGRGLLYLHQDSRLRIIHRDLKTSNILLDDKLIPKISDFGLAKTFGEEEKEGSTKRVVGTYGYMAPEYAADGLYSVKSDVFSYGILMLEIISGKKNRGFYLEDSTHNLASHAWLLWKEGKVLELLDKNMQELCNVSEVVRCIHVSLLCVQQNPDDRPTIASAILMLESEVALPEPKQPGFFPGVGSLKEHTSSPNQKECSSTNKFFCNKRNLACIGLPYRLYNSMDIVSFITTVVSILVPSFQASVAESSILQSNSPMSDSTRIFSKGGSFELGFFTPGNSGKQYLGIWYRSIPIQTVVWVANRDNPINGSSTTATLTLNSTGSLVLTQNDSVIWYSTPLKPVQNSVAELLDSGNLVVRHERGQNSEAYLWQSFDYPTDTLLSGMKLGCDLRTGLNRRLTSWKTPEDPSPGDFSITVDPRNHPELYILRGKSKFFRTGPWNGVGFGGSPELKQNPIFDFGFVSTRDEIYYYWHSLKNSSVISRYVINQTEEARIRYVWTKGEENWKSYTKKPSDNCDQYKWCGPNGECVITGSPPCQCLKGFTPKSPQKWNSVDWSDGCVRNKPLNCSENGTDKFIKLEGLKVPETTDAWLDKAMNLEQCREKCLENCSCMAYTNSDIRGGGSGCALWFGDLNDIRSYASGGQDLYVRMPASELESGNNKKLIMIVAIAVAVILCMLLVGGYLICKVYRKRIEKSKNAEVEIQNNEREDLDLPLFDLPIIEQATENFSEKNKIGQGGFGPVYWGKLLNEQEIAVKKLSRRSELGLIEFKNEVKFIAKLQHRNLVKLLGCCIHEQEKLLVYEYMSNRSLDSFIFDETKRKLLDWFERFHVIMGIGRGLLYLHQDSRLRIIHRDLKASNILLDDKLIPKISDFGLAKTFGEEEKEGITKRVVGTYGYMAPEYAADGLYSVKSDVFSYGILMLEIISGKKNRGFYLEDSTHNLASHAWLLWKEGKVLELLDKNMQELCNVSEVVRCIHVSLLCVQQNPDDRPTIASAILMLESEVALPEPKQPGFFHGMGSIKGHTSSSSGQKECSSTNEMTVSLLDAR 1653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4654g00003 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1410 1613 - -
Pral4654g00003 1653 Pfam PAN-like domain 1174 1242 IPR003609 -
Pral4654g00003 1653 Pfam PAN-like domain 342 410 IPR003609 -
Pral4654g00003 1653 CDD PAN_AP_plant 339 425 - -
Pral4654g00003 1653 Gene3D Phosphorylase Kinase; domain 1 1291 1409 - -
Pral4654g00003 1653 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Pral4654g00003 1653 SMART ntp_6 345 424 IPR003609 -
Pral4654g00003 1653 SMART ntp_6 1177 1256 IPR003609 -
Pral4654g00003 1653 CDD PAN_AP_plant 1171 1257 - -
Pral4654g00003 1653 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Pral4654g00003 1653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1455 1467 IPR008271 GO:0004672|GO:0006468
Pral4654g00003 1653 ProSiteProfiles Protein kinase domain profile. 1334 1619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00003 1653 Pfam Domain of unknown function (DUF3403) 1608 1653 IPR021820 GO:0004674
Pral4654g00003 1653 FunFam Os04g0303100 protein 64 210 - -
Pral4654g00003 1653 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Pral4654g00003 1653 FunFam Os04g0303100 protein 895 1040 - -
Pral4654g00003 1653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pral4654g00003 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Pral4654g00003 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 577 - -
Pral4654g00003 1653 SUPERFAMILY Protein kinase-like (PK-like) 1318 1616 IPR011009 -
Pral4654g00003 1653 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Pral4654g00003 1653 Pfam S-locus glycoprotein domain 1042 1153 IPR000858 GO:0048544
Pral4654g00003 1653 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 184 IPR036426 -
Pral4654g00003 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 852 981 - -
Pral4654g00003 1653 CDD B_lectin 31 153 IPR001480 -
Pral4654g00003 1653 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00003 1653 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Pral4654g00003 1653 Gene3D Transferase(Phosphotransferase) domain 1 1410 1613 - -
Pral4654g00003 1653 Pfam D-mannose binding lectin 904 1010 IPR001480 -
Pral4654g00003 1653 Pfam D-mannose binding lectin 73 179 IPR001480 -
Pral4654g00003 1653 Pfam Protein tyrosine and serine/threonine kinase 504 768 IPR001245 GO:0004672|GO:0006468
Pral4654g00003 1653 Pfam Protein tyrosine and serine/threonine kinase 1337 1600 IPR001245 GO:0004672|GO:0006468
Pral4654g00003 1653 ProSiteProfiles EGF-like domain profile. 1119 1155 IPR000742 -
Pral4654g00003 1653 ProSiteProfiles Bulb-type lectin domain profile. 856 978 IPR001480 -
Pral4654g00003 1653 Gene3D - 851 981 IPR036426 -
Pral4654g00003 1653 Gene3D - 21 150 IPR036426 -
Pral4654g00003 1653 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Pral4654g00003 1653 SMART serkin_6 1334 1605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00003 1653 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00003 1653 SMART blect_4 31 153 IPR001480 -
Pral4654g00003 1653 SMART blect_4 862 984 IPR001480 -
Pral4654g00003 1653 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 852 1596 - -
Pral4654g00003 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1297 1409 - -
Pral4654g00003 1653 SUPERFAMILY Protein kinase-like (PK-like) 487 788 IPR011009 -
Pral4654g00003 1653 SUPERFAMILY alpha-D-mannose-specific plant lectins 904 1049 IPR036426 -
Pral4654g00003 1653 ProSiteProfiles PAN/Apple domain profile. 1174 1257 IPR003609 -
Pral4654g00003 1653 CDD B_lectin 862 984 IPR001480 -
Pral4654g00003 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4654g00003 Pral-Chr4654 13085 22239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4654g00003 431 787 Receptor kinase-like Gene Family AT4G23230 52.368 6.66e-117 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4654g00003 PK_Tyr_Ser-Thr 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4654g00003 - - tcc:18593897 1822.36