Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4654g00001 ATGGGTATTCTTTGCTTCCTGATTATCAATACTTATTTACTCCCTTCCTTCTCAGTTTCAGTAGCAGTAGATTCCATTGCTCCGACCCAGTTCATAAGAGATGGCATGACCTTAGTTTCTCAAGGTGGAGACTTTGAACTTGGTTTCTTCAGTCCTGGAAAATCAAAGAAACGCTACCTTGGTATTTGGTACAAGAATGTCCCAATTCAGACAGTAGTTTGGGTCGCAAACAGAGTAAACCCAATCAACGGTTCATCAGGTATTCTAACATTAACCGCCAGCGGCAACCTTGTCCTGCGCCAAAATGACACTGTCGTTTGGCAGGCAAACTCAGAGAAAACAGCACGTAATCCAGTGGTGCAGCTCTTGGATTCTGGCAATCTGGTATTGAGAGAGGAAAACGAAGCAAATTCAGAAAATTATTTGTGGCAAAGCTTTGACTTTCCGTCGGATACATTAATGCCAGGTATGAAATTTGGATATAACCTGAAGAAAGGAAAGAACTGGACTCTCACAGCTTGGACGAGTCCAGATGATCCCGCTCCAGGAGACTTCTCTTGCGTTACAGATACCCATAACTATCCAGATTCTGCACTAATGAGAGGAGATAAGGTTTATAGCAGATTTGGACCCTGGAATGGTCTCCACACAAGTGGCTCACCGGACGTGAAACCCAACCCTGTTTATTACTTCAAATTCATCTACAATAAGGAAGAGATCTCCTACACATACTATCTGACAAACAGTTCTGTATATTCAAGGATAGTAATGAACCAAACGGATTACATTCGGTATCGATATGTGTGGGTGGAAGCTAATCAAAACTGGATGGTTTATAAATCAAAGCCAGTAGACTACTGTGACCATTATGGTTTGTGTGGAGCCAATGGGAACTGTATCATCACTGAGTCACCAGTTTGTCAGTGCTTAAAAGGGTTCAATCCTAAGTCACCACAGGCGTGGAATTCCATGGATTGGTCTGCTGGGTGTGTCCGAAATGAACCTCTGAATTGCTCTGAGGATGGTTTTATCAAATTGCAAGGATTGAAAGTGCCAGATACAACCCATACTTGGCTTGATGAGACAATGGCCTTAGAGGAATGTAGACAGAGATGCTTGAATAATTGTTCTTGCACGGCCTTCACAAATTCAGATGTAAGAGGACAAGGGATTGGGTGTGCCATGTGGTTTGGTGATCTTATGGACATCAGACAGTTTGCTTCTGGAGGACAGGATCTGTATGTGCGAATGGCTGCTTCAGAATTAGAAGTGGGAAATCGACGCAGAAAGAAATTGATAATAATAGTTGCTACCACCATTGCTGCAACTTCAGGGATGCTTCTAGTTGGATGTTACTTTATTTGCAATGTCCGCAGAAACATGACTGATAAAGCAAAAATCAAAGAAGAAGATCAACACAGTGAAGGATCTGAAGATGATGCAGACCTCACTTTGCTTGACCTGCCCACGATAGCTGATGCCACTAACAACTTTTCGTTGGAGAACAAAATTGGACAAGGTGGATTTGGAACTGTATATAAGGGAAAATTAGTGAATGGGAAATTAATTGCAGTAAAGAGACTCTCTATGAGCTCAAGACAGGGATTAATTGAATTCAAGAATGAAGTGAGACTAATTGCAAGACTTCAACACCGAAATCTTGTAAAACTTCTTGGTTGCTGCCTTCAAGGACAAGAGAAAATGCTTGTTTATGAGTACATGCCAAATGGAAGCTTGAACTCCTTTATTTTTGATGAAAATCGAGGTAAGTTGCTGGATTGGCCAAAACGTTTTAACATAATTTGCAGTATTGCTCGAGGTCTCATGTATCTTCATCAGGATTCGAGATTGAGAATTATTCATAGAGATTTAAAGGCAAGTAATATTTTACTTGATGAAAAGTTGAATCCAAAGATATCAGATTTCGGCATGGCTAAAACCTTTGGTGGAGAGCAAATAGAAGGCAATACAAATAGAGTAGTGGGTACCTATGGTTACATGGCACCTGAGTATGCAGCGGACGGATTATTCTCAACAAAATCTGATGTGTTCAGCTTTGGTATTCTGGTAATGGAAATTATATATGGGAAGAGAAACAGAGGGTTCTATAATGCAGACCGTTCTCATAACCTCATATGTCATGCATGGTTGCTGTGGAAAGAAGGGAGGGCTCTAGAACTGATAGACAGAAACATAGAGGAGACATACGTTGTATCAGAAATAATGAGATGCATCCACATTAGTCTTCTGTGTGTGCAACAGCATCCTGAAGACAGACCCAGCATGTCTTCTGTTGTTTTGATGTTGGGGAGTGAGAATGAGTTGAATGAGCCTAAACAACCTGGTTTCTTTACGGGGAAGGCTACATCAGAAGCAAGTTCATCATCAAGTCATCAAATGCAGTCTGGTTCAACTAATGAAATAACACTCACCTTACTAGAGGCTCGGTGA 2451 0.4121 MGILCFLIINTYLLPSFSVSVAVDSIAPTQFIRDGMTLVSQGGDFELGFFSPGKSKKRYLGIWYKNVPIQTVVWVANRVNPINGSSGILTLTASGNLVLRQNDTVVWQANSEKTARNPVVQLLDSGNLVLREENEANSENYLWQSFDFPSDTLMPGMKFGYNLKKGKNWTLTAWTSPDDPAPGDFSCVTDTHNYPDSALMRGDKVYSRFGPWNGLHTSGSPDVKPNPVYYFKFIYNKEEISYTYYLTNSSVYSRIVMNQTDYIRYRYVWVEANQNWMVYKSKPVDYCDHYGLCGANGNCIITESPVCQCLKGFNPKSPQAWNSMDWSAGCVRNEPLNCSEDGFIKLQGLKVPDTTHTWLDETMALEECRQRCLNNCSCTAFTNSDVRGQGIGCAMWFGDLMDIRQFASGGQDLYVRMAASELEVGNRRRKKLIIIVATTIAATSGMLLVGCYFICNVRRNMTDKAKIKEEDQHSEGSEDDADLTLLDLPTIADATNNFSLENKIGQGGFGTVYKGKLVNGKLIAVKRLSMSSRQGLIEFKNEVRLIARLQHRNLVKLLGCCLQGQEKMLVYEYMPNGSLNSFIFDENRGKLLDWPKRFNIICSIARGLMYLHQDSRLRIIHRDLKASNILLDEKLNPKISDFGMAKTFGGEQIEGNTNRVVGTYGYMAPEYAADGLFSTKSDVFSFGILVMEIIYGKRNRGFYNADRSHNLICHAWLLWKEGRALELIDRNIEETYVVSEIMRCIHISLLCVQQHPEDRPSMSSVVLMLGSENELNEPKQPGFFTGKATSEASSSSSHQMQSGSTNEITLTLLEAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4654g00001 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Pral4654g00001 816 SUPERFAMILY Protein kinase-like (PK-like) 484 785 IPR011009 -
Pral4654g00001 816 MobiDBLite consensus disorder prediction 777 816 - -
Pral4654g00001 816 ProSiteProfiles Protein kinase domain profile. 498 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00001 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Pral4654g00001 816 SMART blect_4 29 149 IPR001480 -
Pral4654g00001 816 Pfam Protein tyrosine and serine/threonine kinase 499 767 IPR001245 GO:0004672|GO:0006468
Pral4654g00001 816 CDD B_lectin 29 149 IPR001480 -
Pral4654g00001 816 CDD PAN_AP_plant 335 418 - -
Pral4654g00001 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 573 - -
Pral4654g00001 816 Gene3D - 18 146 IPR036426 -
Pral4654g00001 816 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Pral4654g00001 816 SMART ntp_6 338 417 IPR003609 -
Pral4654g00001 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 146 - -
Pral4654g00001 816 SMART serkin_6 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4654g00001 816 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Pral4654g00001 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 760 - -
Pral4654g00001 816 Pfam PAN-like domain 338 403 IPR003609 -
Pral4654g00001 816 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Pral4654g00001 816 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Pral4654g00001 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Pral4654g00001 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Pral4654g00001 816 Gene3D Transferase(Phosphotransferase) domain 1 574 782 - -
Pral4654g00001 816 CDD STKc_IRAK 504 769 - -
Pral4654g00001 816 Pfam D-mannose binding lectin 71 174 IPR001480 -
Pral4654g00001 816 ProSiteProfiles PAN/Apple domain profile. 338 418 IPR003609 -
Pral4654g00001 816 Pfam Domain of unknown function (DUF3403) 773 816 IPR021820 GO:0004674
Pral4654g00001 816 Gene3D Phosphorylase Kinase; domain 1 457 573 - -
Pral4654g00001 816 MobiDBLite consensus disorder prediction 786 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4654g00001 Pral-Chr4654 8345 11580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4654g00001 432 783 Receptor kinase-like Gene Family AT4G23230 53.258 5.27e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4654g00001 PK_Tyr_Ser-Thr 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4654g00001 - - pcin:129316778 1091.26