Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00076 ATGAGGGAGGAATCAACCGGACTGATCATTGGGATTTCTATTGGCGTAGTTATTGGTGTCGTTTTGGCTATTTCTGCACTTTTCTGTGTCAGATACCATAGGAAGCGATCGCAGATTGGGAGTAGCAGTTCACGGAGGGCGGCTACGATACCCATCCGTACAAATGGAGCTGATTCTTGTACCGTTCTATCGGACTCAACCTTAGGCCCAGAATCTCCTGTTAAGTCGGGACGAAATGGCATGTCCTTCTGGTTTGATGGCTTCAAGAGAAACAACGTCGTTTCAGCTTCTGGAATACCAGAGTATCCTTACAAGGATTTGCAGAAGGCGACCTGTAATTTTACAACACTTATAGGACAAGGTGCATTTGGTCCCGTTTATAAAGCTCACATGTCCACTGGCGAGACCGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGAGAAAGAGAATTCCATACAGAGGTTATGTTGTTGGGAAGGCTGCATCATAGGAACCTTGTTAATTTGGTTGGATATTGCGCAGAGAAGGGACAACATATGCTTGTATATGTCTATATGAGCAAAGGCAGCTTGGCTTCCCACCTGTACAGTAAGGAGAACGGAGCAATGAGCTGGGATTTGAGAGTTCACATTGCTCTAGATATAGCGAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCTCCGGTAATCCACCGAGATATCAAGTCCTCAAACATTTTGCTAGACCAGTCCATGAGAGCCAGGGTTGCTGATTTTGGACTCTCAAGAGAAGAGAAGGTGGACAAGCACGCAGCCATCCGGGGCACTTTTGGGTATCTAGACCCAGAGTACATATCCTCAGGAACATTCACCAAGAAAAGTGACGTGTACAGTTATGGAGTTTTGCTTTTTGAACTCATAGCAGCCAGAAATCCTCAACAAGGTCTTATGGAATTAGTTGAGCTAGCTTCAATGAACAGTGAGGGGAAAATGGGGTGGGAGGAGATAGTGGACTCTGCATTAGAAGGGGAATATGATGCAGAGGAGCTGAATGAAGTAGCGGGGCTCGCATACAAATGCATAAACCGGGCACCAAGGAAGCGACCTTCCATGAGAGACGTGGTTCAAGTACTCACGAGGATCCTTAAAACCAGAAAATCTAAAAACCGTCGCAGGGCAGATGAAGTGTGCATTGATGTGGATCAGGCTGAAGCAAGGATTCATCGCAGAGAAGAATCTATGGACAGTGCAGCTGACACCTATGAAGTGTAG 1260 0.4603 MREESTGLIIGISIGVVIGVVLAISALFCVRYHRKRSQIGSSSSRRAATIPIRTNGADSCTVLSDSTLGPESPVKSGRNGMSFWFDGFKRNNVVSASGIPEYPYKDLQKATCNFTTLIGQGAFGPVYKAHMSTGETVAVKVLATNSKQGEREFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSKENGAMSWDLRVHIALDIARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEKVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSYGVLLFELIAARNPQQGLMELVELASMNSEGKMGWEEIVDSALEGEYDAEELNEVAGLAYKCINRAPRKRPSMRDVVQVLTRILKTRKSKNRRRADEVCIDVDQAEARIHRREESMDSAADTYEV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00076 419 Gene3D Transferase(Phosphotransferase) domain 1 188 403 - -
Pral4653g00076 419 SUPERFAMILY Protein kinase-like (PK-like) 100 382 IPR011009 -
Pral4653g00076 419 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Pral4653g00076 419 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4653g00076 419 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4653g00076 419 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Pral4653g00076 419 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 187 - -
Pral4653g00076 419 PANTHER OS01G0750732 PROTEIN 5 389 - -
Pral4653g00076 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Pral4653g00076 419 CDD STKc_IRAK 118 377 - -
Pral4653g00076 419 FunFam calcium/calmodulin-regulated receptor-like kinase 1 188 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00076 Pral-Chr4653 409852 413080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00076 24 374 Glycoside Hydrolase AT3G07070 38.692 2.63e-72 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pral4653g00076 PK_Tyr_Ser-Thr 1.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00076 - - gmx:100799586 692.96