Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00072 ATGGGCGACTACTCTATTGGATCTTCCCATTATATTTTTGGAAATTCAGTCAAAGAGGAGAAACTTGGGTTTCAGTCATCAAGTAACAACACTGGTGACCACAAAATGATATCATCGGTGAATGCCAATTCCCATGTCAGCTCCAATATTTTCCATACCACAGTGCAGGAAGCTCAATCAATAGGAGCTGTCAGTTTTGCTGCTGGATCATCAATTGAACAAAAACCTCCTCCTGGGAAGGAGGGAACCACCACTTCCGGATTGCCTCCTCTAAAACCTCCTCCCGGCAGGGTGGGAACCACCAATTCTGGATTGCCTCCTCTAAAGCCACCTCCTGGGAGGGCAGGAACCACCACTTCTGGATTGCCTCCTCTAAAACCTCCTCCCGGCAGACTGAACCCCCTCCCCCCTGAACCGCCTTTCAGAGCTGATACTGCTGCTCCACCCCCTCCACCTCCTGCACCTTCACACCCTGTAAAATCTCACTCTGAATCTGGAGGAGTTCCAACTCCTGGACCTTCTCCCCCTTCTGCACCCCCACAGCCTGTGACACTTCATTCTAATGCTGGTGGAGCTCCGCCTCCTGGACCTCCACCACCACCACCATCACCACCAATGCCACCTGGTACCCGACCAGGTGTTCATCCATCTCCACCTCCTCCTCCAAAAGGTGGTATAGCTCCCCCACGACCTCCTCCACCTATTGGTCCAAAGATAGGGCAGCTAAAATCTCCACAGAATGCAGGAGCTGGTTCAGAAGGGGAAGCCCATGCTCCTAAAGCCAAGCTAAAACCTTTTTTCTGGGATAAGGTGCAAGCCAACTCAGATCATTCGATGGTCTGGAACCAGATTAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACTCTTTTTGGCTACAGTAATGTGGATAAATGCAAAGGCGAACCGAAGAAACAGTCATCATCCCAAGACCCTGCAACTCAGTTTATCCAGATAATTGACAGGAAGAAAGCACAAAATTTGTTGATTTTGTTGCGAGCCTTGAACATCTCAACGGAAGAAATTTGTGATGCACTTCATGAGGGAAATGAGCTTCCCTCAGAATTTCTGCAAACCTTGCTGAAGATGGCACCAACATCCGAGGAAGAACTTAAACTTAGACTTTTCAGTGGTGAAATGTCCCAACTTGGCCCTGCAGACCGATTCATAAAAGCTTTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCATTGCTTTTCATGAGTACTTTTCAAGAGGATCTCACTGCTACTAAGGAGTCCTTTGCAACTTTAGAGGTTGCATGTAAGGAGCTAAGAAGCAGTCGGCTGTTCCTCAAGCTTCTAGAAGCTGTTCTTAAAACCGGAAACCGAATGAATGATGGTACATATCGTGGCGGTGCACAAGCATTTAAACTTGATACGCTACTGAAATTGTCTGATGTGAAAGGAACGGATGGCAAGACCACACTCTTACACTTCGTAGTCCAAGAGATAGTCCGCTCTGAGGGCAAAAGAGCTGTTCGACTGGAAAAAGAAAACCAGGGTTCCTTTGACATCAAAAAAGATGGCTGTCTTGAGGATGTATCTGATGAAACTGAGGAACGCTATCACGATCTTGGTCTTCAGGTGGTTTCACATTTGAGCAGCGAACTAGAAAATGTTAAGAAAGCAGCGGCTATTGATGCTGACAGCTTAACGGGAACTGCTGCCAAACTTGGCCATGGCCTCCTTAAAATCAGAAATTTTGTGAACACTGACTTGAAGAGCATAGAGGAAGATAGAAAATTTTGTCAGGCGGTGAAGGCTTTTGTGCAGGATGCTGAGAATGATGTCACTAGTCTGCTGGAAAAAGAGAAGAACATCATGGCTCTGGTGAAGAGCACTGGTGATTATTTCCACGGGAAAGCTGGGAAAGATGAAGGATTGCGGTTGTTCATGATTGTACGGGACTTCTTGATGATGTTAGATAAGGTGTGCAAGGAGGTGAAAGACGCCCAGAAGAAGCAAACAAAAGCTCAAAAGCAAGAGGCGCCTAAAGCATCATCTTCCTCTGATGTTCGTTCATCACCTGATTTTCGTCAGCTGCTATTCCCAGCAATTGCAGATAGGCGGGTGAAAGACGATAGTTCAGACGAGGAGAATGAACCTTGA 2163 0.4651 MGDYSIGSSHYIFGNSVKEEKLGFQSSSNNTGDHKMISSVNANSHVSSNIFHTTVQEAQSIGAVSFAAGSSIEQKPPPGKEGTTTSGLPPLKPPPGRVGTTNSGLPPLKPPPGRAGTTTSGLPPLKPPPGRLNPLPPEPPFRADTAAPPPPPPAPSHPVKSHSESGGVPTPGPSPPSAPPQPVTLHSNAGGAPPPGPPPPPPSPPMPPGTRPGVHPSPPPPPKGGIAPPRPPPPIGPKIGQLKSPQNAGAGSEGEAHAPKAKLKPFFWDKVQANSDHSMVWNQIKSGSFQFNEEMIETLFGYSNVDKCKGEPKKQSSSQDPATQFIQIIDRKKAQNLLILLRALNISTEEICDALHEGNELPSEFLQTLLKMAPTSEEELKLRLFSGEMSQLGPADRFIKALVDIPFAFKRMEALLFMSTFQEDLTATKESFATLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGKRAVRLEKENQGSFDIKKDGCLEDVSDETEERYHDLGLQVVSHLSSELENVKKAAAIDADSLTGTAAKLGHGLLKIRNFVNTDLKSIEEDRKFCQAVKAFVQDAENDVTSLLEKEKNIMALVKSTGDYFHGKAGKDEGLRLFMIVRDFLMMLDKVCKEVKDAQKKQTKAQKQEAPKASSSSDVRSSPDFRQLLFPAIADRRVKDDSSDEENEP 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00072 720 ProSiteProfiles Formin homology-2 (FH2) domain profile. 253 685 IPR015425 -
Pral4653g00072 720 SMART it6_source 253 673 IPR015425 -
Pral4653g00072 720 MobiDBLite consensus disorder prediction 122 158 - -
Pral4653g00072 720 MobiDBLite consensus disorder prediction 679 694 - -
Pral4653g00072 720 SUPERFAMILY Formin homology 2 domain (FH2 domain) 197 677 - -
Pral4653g00072 720 Gene3D Formin, FH2 domain 258 693 IPR042201 -
Pral4653g00072 720 PANTHER FORMIN-RELATED 166 708 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral4653g00072 720 Pfam Formin Homology 2 Domain 255 659 IPR015425 -
Pral4653g00072 720 MobiDBLite consensus disorder prediction 70 258 - -
Pral4653g00072 720 MobiDBLite consensus disorder prediction 670 720 - -
Pral4653g00072 720 Coils Coil 659 679 - -
Pral4653g00072 720 MobiDBLite consensus disorder prediction 191 239 - -
Pral4653g00072 720 MobiDBLite consensus disorder prediction 704 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00072 Pral-Chr4653 387076 391009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00072 226 709 FH2 protein (formin) Gene Family AT5G54650 64.344 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00072 - - pcin:129315422 1042.72