Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00047 ATGTCTCTAATTGAATATATAAACACCCTTCTATCTTCTTTTTTGATTAATCTGAGTCTCGATCTCTCAGATTCAGAAAGCTCTTTAATTTCTTTTATTTTATTATTGTGTTCTTTTTTGCGTTGTGTTGTCGGATTTTCCATGGCTGCAAATGGTGGGGATCTTTCTCCCTCTGAAGGTTCAAGCATCTCGGGAGGGTCCAAAGGAAAAGCTATCAGAGAAGTGATCGAAAACCAGAAGATGAAGTTGGTTCAAATCACTCATGAAGACTCTCTTCATAAGCCGAAGATCAAACTGGATACGTTCAAATTTGGATTGAACATCGCAGGTTGTTCTTCATCTAAAATAGACATCAACAACGACAAAGGAAAAGATCATGAACGTCATTGTCATCACGATGAACCTGATCATTATGATAAAAGAACACAGAAGACTTTCTGCTGCAACTTCTGCAAAAGAGAGTTTTCTTCCTCACAAGCCTTAGGAGGCCATCAAAATGCCCACAAACAAGAGCGTGCAATCGCTAAACAACGACAAGTAGGGATTATCTCTGACCATCATTTCAGTGTTCTAGGGCGTCACTATTCTCCACACTTTCCTCATTATAGTAATTACCCCTATTATGCTAATTACCCTCAGATTAATTATGGGTCTTTCAGTTGTAATAATAGACCACTTGGGGTTAAATTGGAGTCCATGATTCATAAGTCGCCTCAGAAGTCTAGTTTTATACTTAGGCGTGATCATCAAACCCCAGGAAGGCTTAGGGCCAGTTCAGGAACTTTGAGGATTGAAGAAATTGGTAATATCAGTCCTCTGACTCGGCAATTCGAGCATATTTCTTCTTCTTCAGCTGCTTACGATAGCACAATTGGTGATCAACATATCAAGGTTTTGCCACAGAAAGCTTTGAAAGAGAAGGACGATAATCTTTATACTTCAGGCCTTGACTTGTCACTTAAGCTTTAA 969 0.3901 MSLIEYINTLLSSFLINLSLDLSDSESSLISFILLLCSFLRCVVGFSMAANGGDLSPSEGSSISGGSKGKAIREVIENQKMKLVQITHEDSLHKPKIKLDTFKFGLNIAGCSSSKIDINNDKGKDHERHCHHDEPDHYDKRTQKTFCCNFCKREFSSSQALGGHQNAHKQERAIAKQRQVGIISDHHFSVLGRHYSPHFPHYSNYPYYANYPQINYGSFSCNNRPLGVKLESMIHKSPQKSSFILRRDHQTPGRLRASSGTLRIEEIGNISPLTRQFEHISSSSAAYDSTIGDQHIKVLPQKALKEKDDNLYTSGLDLSLKL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00047 322 ProSitePatterns Zinc finger C2H2 type domain signature. 147 168 IPR013087 -
Pral4653g00047 322 ProSiteProfiles Zinc finger C2H2 type domain profile. 146 173 IPR013087 -
Pral4653g00047 322 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 56 322 IPR044246 GO:0009788
Pral4653g00047 322 SUPERFAMILY beta-beta-alpha zinc fingers 143 174 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00047 Pral-Chr4653 264636 266930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00047 76 236 C2H2 Transcription Factor Family AT5G10970 32.515 2.85e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00047 - - pcin:129316645 250.366