Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00045 ATGAATTATCCTAGCTTTCCGGGCAGTTCATCTTCTCGGAGGACCTGGAAATACGAAGTTTTTCTGAGTTTCAGAGGTGAGGATACTCGGAATAGTTTCGCTGGTCATCTTTTTTCTGCTCTTCAACGGAAAGGTATATTTACCTTCAAGGATGACAAAAGGCTCGAGAAAGGAGAACCCATTAAACCTGAGCTCCTCAAAGCAATTGAGCAATCCCGAATTTCTTTCGTCGTCTTTTCCCAAAACTATGCCGATTCATCATGGTGCTTGGACGAGCTGGCGAAGATATCTGAGGGAATTAGCGAACCAGGATACTTTATCGTACCAATTTTCTTCGATGTCGATCCATCTGATGTTCGAAGACAGAGTGGGAAATATAGAGAATTCTTTGATAAACATGAAAGAGACTTCTGTGATAATATAGATAAGGTTCAAAGATGGAGGATAGCGTTGACTCAAGTAGCCAGTCTTGCTGGTTATGATGTACGGGCTAAATCAGAGTCTGATGTCATTGATGAAATTGTTACTGATGCAATACGCAAATTGGGTCATAGATTCTCAAGTCTGGCTGATGATCTAGTTGGGATGCAATCTCGTGCAGAAGCATTTGAAAACCTTTTAGATTTAGAATCAGAAGATGTTCGAAAAGTAGGCATGTGGGGGATGCCTGGAGTAGGGAAGACTACTCTAGCTGCAGTTGTATACGATAGGATCTCTCACCGTTTTGATGCTTGCTGTCTTCTTCTTGATGTAAGTAAAGTTCACAAGGGTCCTGGACTTGTACGTCTGCAAAAACAACTCCTCCGTGAAACACTGCAGGAAGATATAGAGATATGGGAAGATCACAGGGGAACCAATTTAATAAGCACTAGGCTTCACCACCTTAAAACTCTTATTGTTGTTGACAATGTTGATCATGCTGATCAATTGGAGAAACTGGTTGGAAAGTCCTCATGGTTTGGGCCGGGAAGTAGGATCATCATAACAACTAGAGATTTGCACATCTTAACCAGGCATGGAGTGGATGAAGTTTATGAGGTTAAACTACTGAATGAAGATGAAGCTCTTCAACTTCTCTGTAGAAAAGCCTTCAAACAAGATGATCCCTTGAGTGACTTTAAAGCGATGACTCATAGTCTGCTACAATATGCTAAAGCCCTTCCACTGGTAATCAAAGTGTTAGGTTCCTTTATGTATGGGTTGGAAATATCAGAGTGGATTGCTCAGTTAGAAAGACTGAGAGAAAATCCTGACCAAGAGGTTATGGGAGTTCTTGAAACAAGTTTTGTTCGGCTTGAGAAGAAGGACAAGGATATATTTGTAGACATTGCTTGTTTCTTCAAGGGAGGAGACGAGAACTATGTGACAAAAATTCTAGAACATTGTGGATTCAATCCTAAAATTGGACTTAGGGTTCTCCGTGACAGATCACTTCTGAACATTGTTAATGGAACATTCTGGATGCACGATATGCTGCAAGAACTGGGATGGAAATTCGCAAGGGGAGAATTTCCTGATGAGCCAGCAAAGTGGAGTAGGCTGTGGTCATACAAAGATATTCAAACCGTAAAGACAGGAACGGAAAAAGTTGAAGCCATCGTCCTGAGCCCGGAAGATCTGCAAGAGACGCCATTGAAGGCTGAGGCTTTATCACAAATGAACCGCCTCAGATTAATCATATTCCCTGATAATGTGAAATTTTCAGGAAACCTCACTAGCCTGTCCAACGAGTTACGAGTTCTTTCATGGCATAAATTTCCTTTCAGCTCTTTGCCATCAGGTTTTGAACCAGATAAACTTGTCGAGCTGATCATGCCTGACAGCAACGTAAGACAACTATGGGAAGGCGAAAAGAGATTGCCAAAGTTGAGAAACATGGATCTACGTGGCTCTAAAAGTCTGATCAAGACGCCAAATGTTAAAGGAGCAGAAAATGTTGAGAGGTTAGATCTTGAAGGATGTACTGGATTGTTGCAGGTCGATCCGTCTGTTGGAGATCTTAAAAAGATCACGTTCCTGAATTTGAGAAACTGTAATCATCTCATAAGCATCCCAAACACCTTATTTCTGTTAACTTCTCTTGAAATTCTGAACCTTTCGGGCTGCTCAAGACTTGCGAAATGGTTGAACTTCGAAGGACCTCGATAG 2148 0.4157 MNYPSFPGSSSSRRTWKYEVFLSFRGEDTRNSFAGHLFSALQRKGIFTFKDDKRLEKGEPIKPELLKAIEQSRISFVVFSQNYADSSWCLDELAKISEGISEPGYFIVPIFFDVDPSDVRRQSGKYREFFDKHERDFCDNIDKVQRWRIALTQVASLAGYDVRAKSESDVIDEIVTDAIRKLGHRFSSLADDLVGMQSRAEAFENLLDLESEDVRKVGMWGMPGVGKTTLAAVVYDRISHRFDACCLLLDVSKVHKGPGLVRLQKQLLRETLQEDIEIWEDHRGTNLISTRLHHLKTLIVVDNVDHADQLEKLVGKSSWFGPGSRIIITTRDLHILTRHGVDEVYEVKLLNEDEALQLLCRKAFKQDDPLSDFKAMTHSLLQYAKALPLVIKVLGSFMYGLEISEWIAQLERLRENPDQEVMGVLETSFVRLEKKDKDIFVDIACFFKGGDENYVTKILEHCGFNPKIGLRVLRDRSLLNIVNGTFWMHDMLQELGWKFARGEFPDEPAKWSRLWSYKDIQTVKTGTEKVEAIVLSPEDLQETPLKAEALSQMNRLRLIIFPDNVKFSGNLTSLSNELRVLSWHKFPFSSLPSGFEPDKLVELIMPDSNVRQLWEGEKRLPKLRNMDLRGSKSLIKTPNVKGAENVERLDLEGCTGLLQVDPSVGDLKKITFLNLRNCNHLISIPNTLFLLTSLEILNLSGCSRLAKWLNFEGPR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00045 715 Pfam Leucine Rich Repeat 599 618 IPR011713 -
Pral4653g00045 715 Pfam NB-ARC domain 210 414 IPR002182 GO:0043531
Pral4653g00045 715 SUPERFAMILY L domain-like 501 704 - -
Pral4653g00045 715 Pfam TIR domain 17 192 IPR000157 GO:0007165
Pral4653g00045 715 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Pral4653g00045 715 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
Pral4653g00045 715 Gene3D Ribonuclease Inhibitor 518 711 IPR032675 -
Pral4653g00045 715 Gene3D - 185 345 IPR027417 -
Pral4653g00045 715 Gene3D - 14 184 IPR035897 -
Pral4653g00045 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 443 IPR027417 -
Pral4653g00045 715 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 709 IPR044974 GO:0006952
Pral4653g00045 715 SMART till_3 17 157 IPR000157 GO:0007165
Pral4653g00045 715 Gene3D - 349 433 IPR042197 -
Pral4653g00045 715 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral4653g00045 715 PRINTS Disease resistance protein signature 291 305 - -
Pral4653g00045 715 PRINTS Disease resistance protein signature 216 231 - -
Pral4653g00045 715 PRINTS Disease resistance protein signature 384 398 - -
Pral4653g00045 715 PRINTS Disease resistance protein signature 689 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00045 Pral-Chr4653 260709 263395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00045 3 708 WRKY Transcription Factor Family AT4G12020 32.369 6.75e-101 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00045 - - pcin:129315185 1036.56