Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00044 ATGAACAGAAATTCCCACAATTTCACACCCTTACCTGGTGCTCGCCGATCTGTCGCAAGAGCTCATGATACCCATAGTGGCTACGATGAGGCGCCTCACTTTTACCGATCTCGTTCTGCCCAATCTACTCCTGATTACAGGATTTTAGGCGTGCAAGATACCCCAAGGTTGATGGGAGACAGAACACTTTCAGGACTCAATCGCACACCCAGTTTTCCAGCACAACCACATCTCAGACAACAAATGAATGGATCCAATGGAGGCATGAGAAGGGGGTTGAACCCGTGTTCGGGGAGATTGTCCAGCAGTCGCCTCCAAGAACCGCAGAAAATCCCAATTCAGCATGTTGCGAATGCTTTAAAAGAGAGAGATAGGGAAAAGCAAGAACGTCGCAAGAGGTGTGCTATTTGCTTGGAAGATTTTGAACCTCGTGAGGAAGTGATGCTCACACCATGCAAACATGTGTTTCATGAGGATTGTATTGTTCCATGGCTAAGAAGCAAAGGCCAGTGCCCTGTTTGTAGATTTGTGATTTGTGAGGAGATGAATGAGCACGCTTCATCCTTCAACGACGATATTGCCATGCTGGGACCCAATGACCACCTAATTGCAGCCGAGCTTCTGTCAATTTTTGGAGCCATGGAACAAGCTCTCGAAATGGGCGGTTGA 669 0.4768 MNRNSHNFTPLPGARRSVARAHDTHSGYDEAPHFYRSRSAQSTPDYRILGVQDTPRLMGDRTLSGLNRTPSFPAQPHLRQQMNGSNGGMRRGLNPCSGRLSSSRLQEPQKIPIQHVANALKERDREKQERRKRCAICLEDFEPREEVMLTPCKHVFHEDCIVPWLRSKGQCPVCRFVICEEMNEHASSFNDDIAMLGPNDHLIAAELLSIFGAMEQALEMGG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00044 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 191 IPR013083 -
Pral4653g00044 222 SMART ring_2 134 174 IPR001841 -
Pral4653g00044 222 FunFam RING/U-box superfamily protein 118 192 - -
Pral4653g00044 222 SMART ringv_2 133 175 IPR011016 GO:0008270
Pral4653g00044 222 ProSiteProfiles Zinc finger RING-type profile. 134 175 IPR001841 -
Pral4653g00044 222 MobiDBLite consensus disorder prediction 1 39 - -
Pral4653g00044 222 MobiDBLite consensus disorder prediction 18 32 - -
Pral4653g00044 222 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 56 176 - -
Pral4653g00044 222 SUPERFAMILY RING/U-box 120 182 - -
Pral4653g00044 222 Pfam Ring finger domain 133 175 IPR001841 -
Pral4653g00044 222 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00044 Pral-Chr4653 258115 259410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00044 128 222 C3H Transcription Factor Family AT3G58720 52.577 1.89e-31 114