Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00039 ATGCAGTTTTCGGAGCCGGTGTACATGTTTCCTCAAGTTCAGGAGCCGATGTTGATCCGGAAGAAAGCTCCGACCGCCGCCGCCAAGAAGGACGAGAAAGCCGTCAATGCAGCTCGCCGCGCTGGCGCTGAGGTCGAGACCTTCAAGAAATATAGTGCTGGCACAAACAAGCCTGCTTCTAGTACAACTTCACTGAACACGAAGAGGCTGGATGAAGATAACGAGAATCTAGCTCATGGACGTGTGCCAACTGAACTCAAGAAAGCTATTACGAAAGCTCGGATGGAGAAGAAACTTAGCCAGGCACAGCTTGCTCAGATGATCAATGAGAAACCTCGAGTGATTCAGGAGTACGAATCAGGAAAAGCCATTCCAAACCAACAGATACTTAACAAGCTGGAGAGGGCTCTTGGAGCCAAACTGCGCGGCAAGAAATAG 438 0.5 MQFSEPVYMFPQVQEPMLIRKKAPTAAAKKDEKAVNAARRAGAEVETFKKYSAGTNKPASSTTSLNTKRLDEDNENLAHGRVPTELKKAITKARMEKKLSQAQLAQMINEKPRVIQEYESGKAIPNQQILNKLERALGAKLRGKK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00039 145 Pfam Helix-turn-helix 92 140 IPR001387 -
Pral4653g00039 145 SUPERFAMILY lambda repressor-like DNA-binding domains 84 141 IPR010982 GO:0003677
Pral4653g00039 145 MobiDBLite consensus disorder prediction 53 67 - -
Pral4653g00039 145 MobiDBLite consensus disorder prediction 52 80 - -
Pral4653g00039 145 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 14 145 - -
Pral4653g00039 145 SMART mbf_short4 89 144 IPR001387 -
Pral4653g00039 145 Pfam Multiprotein bridging factor 1 18 82 IPR013729 -
Pral4653g00039 145 Coils Coil 90 110 - -
Pral4653g00039 145 Gene3D - 74 145 IPR010982 GO:0003677
Pral4653g00039 145 FunFam Multiprotein bridging factor 1 74 145 - -
Pral4653g00039 145 ProSiteProfiles Cro/C1-type HTH domain profile. 90 144 IPR001387 -
Pral4653g00039 145 CDD HTH_XRE 88 138 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00039 Pral-Chr4653 230210 233504 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Pral4653g00039 MBF1 4.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00039 K03627 - gmx:100500420 220.705