Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00030 ATGGCGGAGAATATATACTACATATCTGACGAGGACAAGAGCGAAGGTACTGAATTGGAAGCCAGGCCTAAGAAACGTTCATTCTTGGACTTGAACGAAGAAGCTGCGGGTGACGATGGAGAGACAAGTATTGATGGTAGATCTTCTCCAGAAGGGAATTTGAGCAGTAATAACTCAAGCACAGATCAAGTGAGAGAACGAACAACGAGTGTGAGGCAATATGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTCGCTTTTGTGCTCGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACTCCCAAGTTGGTTCTTCAGCTGATGAATGTGAAAGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAAAGCTCGATGAGTCTGGCCAAGTCTTATCCCAAAATAGGGGAACGCAAGGAAGAGCACACATAATGGAGATGTACGAAAGATATAATAAAGCCCAAGGCCACTTTGGGATAGATAACAGAAACTATCAACCGACATCCGTGTTGATGAAACATCCGTATGACTTCAAAGCCCCAGAGTGTTCAAGGTTTCAGCCATGTGGGATCGTGAATAACCAGTGGACAAGATCAAGTTCAGAGTGGAGCAATATTAACACGACAGGGAAATCACACCTATTTGATGTAAGAGATGCAATAACAAGAAGTAGAGAATTTATCGAAGAAAAGAGATGGCCTCATCGTGAAATACTTGGAGTCGGACCACAATTTAGTGACAGACCAAGGATTTCAAGGGCCGATAAGTATAATAATACAATGGAACCTAATAATGCTCCTCTATGGAGAACTAAACCTAGTTCTGTCCATGATCAATACCAACGTAGTTCTGGTGCTCCAGTCTTTTTGTCAACTCATGCGCAATTTGATGCTAAGGTTCATGATGTAAAAGATGGAATCATCCGATGTATAAATGAAGAGGAGCTATCGCGTGCAGCTAAGGTGAAAGCCCAAATATCAGAAAAGTTGAAGGAGAAGAAAGAGGCACCTACAACTACTACAGGTTTCCTAGATTTAAGTTTAAAACATGATTTTGGAAACGTTAGAGAAATGAGCGTCTCCGGTCCAGGAAACGATCAAGTTAATACGAAGCTTTCTCTTTCGTTGTTGTGA 1167 0.4207 MAENIYYISDEDKSEGTELEARPKKRSFLDLNEEAAGDDGETSIDGRSSPEGNLSSNNSSTDQVRERTTSVRQYVRSKMPRLRWTPDLHLAFVLAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRSKKLDESGQVLSQNRGTQGRAHIMEMYERYNKAQGHFGIDNRNYQPTSVLMKHPYDFKAPECSRFQPCGIVNNQWTRSSSEWSNINTTGKSHLFDVRDAITRSREFIEEKRWPHREILGVGPQFSDRPRISRADKYNNTMEPNNAPLWRTKPSSVHDQYQRSSGAPVFLSTHAQFDAKVHDVKDGIIRCINEEELSRAAKVKAQISEKLKEKKEAPTTTTGFLDLSLKHDFGNVREMSVSGPGNDQVNTKLSLSLL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00030 388 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 136 IPR017930 -
Pral4653g00030 388 MobiDBLite consensus disorder prediction 1 33 - -
Pral4653g00030 388 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 59 173 IPR046955 GO:0003700
Pral4653g00030 388 NCBIfam myb-like DNA-binding domain, SHAQKYF class 80 135 IPR006447 GO:0003677
Pral4653g00030 388 MobiDBLite consensus disorder prediction 46 72 - -
Pral4653g00030 388 SUPERFAMILY Homeodomain-like 78 134 IPR009057 -
Pral4653g00030 388 Pfam Myb-like DNA-binding domain 82 132 IPR001005 -
Pral4653g00030 388 FunFam Myb family transcription factor 78 136 - -
Pral4653g00030 388 Gene3D - 79 136 - -
Pral4653g00030 388 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00030 Pral-Chr4653 202802 206455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00030 68 160 G2-like Transcription Factor Family AT2G42660 65.591 1.45e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4653g00030 Myb_DNA-binding 2.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00030 - - lang:109337615 358.607