Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00025 ATGGACTCCCTCACGGGAGCTCTGTCGCCCTCCTCCACTGCTCCGTCTCGGTCGTCGCCGTTTCCCGGTCGGGAAGACTGCTGGAGTGAGGACGCCACCTTCACTCTCATCGATGCTTGGGGTGAACGTCACCTTGAGCTCAATCGAGGAAACCTCCGTCAGAAGCATTGGCAAGAGGTCGCCGACGCCGTTAACGCCAATCATGGCCACGTCAAGAAGGCGCGCCGCACTGACGTTCAGTGCAAAAACCGCATCGACACTCTGAAGAAGAAGTACAAGATCGAGAAGAACAAGGTCATCGATTTCGACGGGAACTATACTAGCCCTTGGCCCTTCTTCGCTCGCCTTGACGCTCTCATAGGCGATACGTTTCCAGTTAAGAGACTTCCGCCGGCGATCGACAGTAGCCGCCGTAGCTCCCCTCCGGCAAAGTCTCCGGCGTGGGTAACCTCACAGGTGCCTGTCGGCCCCCGATCCGGCACTCAGAAACGGCCGGCGTTGCCGGCTCCGGTGCCGGCGAGCATGAAAGACCCGTCTTTCCGTCGGAAATTCTCAGCTTTCGCAGCGGCAGCTGCAGCAGCGGCGGAGGCAGGGGATGCAGACAGTGACGATTCGGATGAGTCAAGGTCAAGTAGTGCCACTGGAAGTAAAAAGAGAGGTAGAGAAAGGGAGAAAAACAGGGAAAGCGATAGGGATTCAGAATTCGGGTACAGAGAGCTGGCACAAGCAATAGAGAGGTTTGGGGAGATATACGAGAGAGTAGAGGCGGCGAAGCAAAGGCAAATGGTGGAGTTAGAGAAACAGAGGATGCAATTTGCTAAGGATTTGGAGTACCAGAGGATGGAGCTTTTCATGGAAACGCAGGTTCAGCTTCAAAAAATCAAACGCGCCAAGCGATCTTCTCAGACTGACAGTTTCTCGTAG 924 0.553 MDSLTGALSPSSTAPSRSSPFPGREDCWSEDATFTLIDAWGERHLELNRGNLRQKHWQEVADAVNANHGHVKKARRTDVQCKNRIDTLKKKYKIEKNKVIDFDGNYTSPWPFFARLDALIGDTFPVKRLPPAIDSSRRSSPPAKSPAWVTSQVPVGPRSGTQKRPALPAPVPASMKDPSFRRKFSAFAAAAAAAAEAGDADSDDSDESRSSSATGSKKRGREREKNRESDRDSEFGYRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMELFMETQVQLQKIKRAKRSSQTDSFS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00025 307 MobiDBLite consensus disorder prediction 138 158 - -
Pral4653g00025 307 Pfam Myb/SANT-like DNA-binding domain 25 119 IPR044822 -
Pral4653g00025 307 FunFam trihelix transcription factor ASIL2 28 94 - -
Pral4653g00025 307 MobiDBLite consensus disorder prediction 204 236 - -
Pral4653g00025 307 MobiDBLite consensus disorder prediction 129 174 - -
Pral4653g00025 307 Gene3D - 28 94 - -
Pral4653g00025 307 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 299 IPR044823 -
Pral4653g00025 307 Coils Coil 251 271 - -
Pral4653g00025 307 MobiDBLite consensus disorder prediction 196 236 - -
Pral4653g00025 307 MobiDBLite consensus disorder prediction 1 25 - -
Pral4653g00025 307 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00025 Pral-Chr4653 156973 160492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00025 2 296 Trihelix Transcription Factor Family AT3G14180 35.040 3.11e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral4653g00025 Myb_DNA-bind_4 1.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00025 - - qsa:O6P43_000824 382.489