Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00019 ATGTCGCAATCTGGGAAGTCTGAGCGAGAACTGGGCTATGACTCTCTTGCGACTCGATTCCGTGATTCGCTGACCTGTGAAGAGAACAAGCCCGATTTCAAAGAACTCGATCTGGGTCCATTCATTTCGCCATTGAAAATCCGCAGCGCAGGTAATGCTAGCAGCGGCGGTGGAGCAGCTGCCACTTCGAGCTCGAGCTCGAGCTCCTCCGGCTCAGTCACAGGCAGAAGCAACGCTCCCAAGTTGCCCAGAAGACCCGACGGAAAGCCAAACCACCATTCTGGCGAGCTCACTGGCTATTTCGATACCAGCCCGAATGCCTCAGAGAGTCTCCGATCCGCTTCGGCAGCGAGCAATTCCAGGCCGGGTCATCGGAGATCGGTTTCGGCTGGAGCCCCATTGCTCTACTCCGGCGGAAGTCATAGCAGCCCGGGGAGTAATAATTGCTCGAACAGTGCAACTTCAGGGAGCAATTTATTCCCAACTGGTAATATTTGTCCTTCGGGAAAGATCCTCAAATCGGGCATGGTGTCTCGAGCTTCCAATAGAACTGATGTGTTGGGTTCTGGAACGGCAAACTATGGCCATGGCAATATAATGCGTGGTGGCACGAAATTGAGCAATTCTGGGCACGTCGTGGATGACAGTGGGGCTGGAAATTCTCAGCTCGGTGGAGCATCGGGGGGTGTTAGACGAGCAATGAGTGGTTCTGATCCGGAAGAGATGAAGAGGACTGGGAATGAGTTATATAGAAGAGGTAATTTTGTGGAGGCATTGTCATTGTACGATCGTGCTATTTCGATATCGCCCAATAATGCAGCCTACCGGAGTAACCGGGCAGCGGCGTTGACGGCGTTGGGGAGACTGGCCGAGGCAGCGAAGGAGTGCGAAGAGGCTGTGAAGTTGGAACCTAATTATGCTCGGGCACATCAGAGGCTGGCTTCTCTCTGCCTGCGCCTTGGACATATCGAACCCGCCAAGCGCCACCTCTATCTCCCTGGGCAACACGTGGATCAATCTGAACTGCAGAAGCTGAGGTTATTGGAGAAACACATGAACCAATGTGCAGAGGCAAGAAAGATTGGTGATTGGAAGACTGCACTTGGGGAATCAAATGCAGCCATTGCAGTTGGAGCAGATTTCTCACCTGAGCTTGTTGCTTGTAAAGTGGAAGCTTATTTAAAACTCCATCAGCTTGTGGATGCTGAGTCCAGTCTCTCAAACATTCCAAAGCTGGAAGGCTGTCCTTTATCCTGCTCTCAAACCAAGTTCTTTGGTATGTTTGGGGAAGCCTATGTGCACTTTGTTTATGCTCAGGTTCATATGGCCATGGGAAGATTTGAGAATGCGGTAGCAGCAGCTGAAAAGGCCAGACTGATAGATTACAGCAATGTAGAAGTTGAGAGGGTTCTAAATACTGTGAAAATGGTAGCAAGAGCTCGTTCAAAGGGCAATGATCTCTTTAGCACTGGCAAATTTTCTGAAGCTTGTTCTGCTTATGGGGAAGGCCTCAAATATGACAGTTTCAACTATGTTCTGTATTGTAATAGAGCTGTTTGTTGGTCTAAACTTGGACTATGGGAAAAATCTGTTGAGGATTGTAACCAAGCTCTCAACATTCAGCCAAATTACACCAAGGCCCTCTTTCGTAGGGCCGCATCAAATGCAAAGCTTGAAAGATGGGCTGAAGTTGTGAAAGATTATGAGACCCTAAAACAAGAACTCCCGGGAGATAATGAAGTTGTCGAATCCCTTCGTAAGGCTCAGTTAGCTTTAATAAAATCTCGTGGGGAGGACCATGCTGGAAAGCATGAAGTTGAAGTTGGAGCTGTCTCTTCGTTGGATGAATTTAAAGCTGCTATTGCTTCTGCTGGTATTTCAGTAGTTCATTTCAAAGAGGCATCGGATGAACTATGTGGAGAAATATCCCCATTCATAAATATGCTGTGCGTCAGATACCCATCTGTTAAATTTATCAAGGTTGATGTGGAGGAGTGTTTAGCTGTAGCAAGAGCTGAGAGCATAAGAACTGTCCCAACGTTCAAAATCTATAAAAATGGAACGAAGGTGAAGGAGATGATTCGGCCAACGCATAAGTTCTTAGAGGAGTCAGTAAGAAGCTATAGTTCCCTCTGA 2136 0.4794 MSQSGKSERELGYDSLATRFRDSLTCEENKPDFKELDLGPFISPLKIRSAGNASSGGGAAATSSSSSSSSGSVTGRSNAPKLPRRPDGKPNHHSGELTGYFDTSPNASESLRSASAASNSRPGHRRSVSAGAPLLYSGGSHSSPGSNNCSNSATSGSNLFPTGNICPSGKILKSGMVSRASNRTDVLGSGTANYGHGNIMRGGTKLSNSGHVVDDSGAGNSQLGGASGGVRRAMSGSDPEEMKRTGNELYRRGNFVEALSLYDRAISISPNNAAYRSNRAAALTALGRLAEAAKECEEAVKLEPNYARAHQRLASLCLRLGHIEPAKRHLYLPGQHVDQSELQKLRLLEKHMNQCAEARKIGDWKTALGESNAAIAVGADFSPELVACKVEAYLKLHQLVDAESSLSNIPKLEGCPLSCSQTKFFGMFGEAYVHFVYAQVHMAMGRFENAVAAAEKARLIDYSNVEVERVLNTVKMVARARSKGNDLFSTGKFSEACSAYGEGLKYDSFNYVLYCNRAVCWSKLGLWEKSVEDCNQALNIQPNYTKALFRRAASNAKLERWAEVVKDYETLKQELPGDNEVVESLRKAQLALIKSRGEDHAGKHEVEVGAVSSLDEFKAAIASAGISVVHFKEASDELCGEISPFINMLCVRYPSVKFIKVDVEECLAVARAESIRTVPTFKIYKNGTKVKEMIRPTHKFLEESVRSYSSL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00019 711 MobiDBLite consensus disorder prediction 205 223 - -
Pral4653g00019 711 CDD TRX_family 615 696 - -
Pral4653g00019 711 SUPERFAMILY TPR-like 240 329 IPR011990 GO:0005515
Pral4653g00019 711 Gene3D Tetratricopeptide repeat domain 237 596 IPR011990 GO:0005515
Pral4653g00019 711 MobiDBLite consensus disorder prediction 1 20 - -
Pral4653g00019 711 ProSiteProfiles TPR repeat profile. 239 272 IPR019734 GO:0005515
Pral4653g00019 711 Pfam Thioredoxin 614 696 IPR013766 -
Pral4653g00019 711 MobiDBLite consensus disorder prediction 205 243 - -
Pral4653g00019 711 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 706 IPR044534 -
Pral4653g00019 711 MobiDBLite consensus disorder prediction 55 77 - -
Pral4653g00019 711 MobiDBLite consensus disorder prediction 97 125 - -
Pral4653g00019 711 SUPERFAMILY TPR-like 349 472 IPR011990 GO:0005515
Pral4653g00019 711 SUPERFAMILY TPR-like 476 589 IPR011990 GO:0005515
Pral4653g00019 711 Pfam Tetratricopeptide repeat 433 457 IPR019734 GO:0005515
Pral4653g00019 711 Gene3D Glutaredoxin 597 709 - -
Pral4653g00019 711 FunFam TPR repeat-containing thioredoxin TTL4 603 709 - -
Pral4653g00019 711 SUPERFAMILY Thioredoxin-like 535 706 IPR036249 -
Pral4653g00019 711 MobiDBLite consensus disorder prediction 46 152 - -
Pral4653g00019 711 SMART tpr_5 477 510 IPR019734 GO:0005515
Pral4653g00019 711 SMART tpr_5 239 272 IPR019734 GO:0005515
Pral4653g00019 711 SMART tpr_5 511 544 IPR019734 GO:0005515
Pral4653g00019 711 SMART tpr_5 273 306 IPR019734 GO:0005515
Pral4653g00019 711 SMART tpr_5 431 464 IPR019734 GO:0005515
Pral4653g00019 711 SMART tpr_5 545 578 IPR019734 GO:0005515
Pral4653g00019 711 Pfam TPR repeat 246 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00019 Pral-Chr4653 117413 121086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00019 229 313 U-box Gene Family AT3G07370 32.941 1.99e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00019 - - qsa:O6P43_028907 894.804