Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00015 ATGGAACTCACAGAAAGGAGTGACTTAATGGAAGGTTTTGATTGGGGTTCAGGCATTTGGGGAAATGCCTCAGAGAAAACTAGTCATGGTTTTATAGTTAATTCTGGTATTATAGAAAGTGGGTTTGCTTCATCTTCGTCTCTGGTTTTGGATGACCAGATAGGTGAGCTCGTGGAGGCTTCTGTCAAAGAACGAAACAAGGGCTTGTCCTCTGAGAGAAGCGTCGCCGCTTTGAAGAATCATAGCGAGGCGGAACGTAGGAGAAGAGCAAGGATCAATGCTCATCTTGATACTCTTCGCACAGTAATTCCAGGTGCTAACAAGATGGACAAAGCATCGTTACTTGCTGAGGTGATCAGACACTTGAAAGAGCTTAAAGGGAATGCAGCACAAGCTTGTGAAGGTTTGATGATACCAAAGGACAGCGATGAGATAAGAGTTGAAGAACAAGAAGGTGGCTCTAATGGATTTCCTTATTCAATAAAGGCATCTCTGTGTTGTGAGTATAAACCTGGGTTATTGTCTGATATAAGACAAGCACTTGACGCTCTTCATCTGATGATAATGAACGCAGAAATTGCGACCTTGGGAGGAAGGATGAAGAATGCGTTTGTGATTATAAGCTGCAAAGAGAACAACATTGAAGATTCTGAGTATAGGCAGTTTCTTGCTGGTTCTGTTCAGCAAGCTCTCAAGTCTGTGGTTGACAGATTCTCTGCTTCACAAGACCTCTTAGGAATGAGGAAGAGGAGAAGGATTTCTGTATTCAATTCATCATTCTCTGTGGGAGAATTGTGGTGA 801 0.427 MELTERSDLMEGFDWGSGIWGNASEKTSHGFIVNSGIIESGFASSSSLVLDDQIGELVEASVKERNKGLSSERSVAALKNHSEAERRRRARINAHLDTLRTVIPGANKMDKASLLAEVIRHLKELKGNAAQACEGLMIPKDSDEIRVEEQEGGSNGFPYSIKASLCCEYKPGLLSDIRQALDALHLMIMNAEIATLGGRMKNAFVIISCKENNIEDSEYRQFLAGSVQQALKSVVDRFSASQDLLGMRKRRRISVFNSSFSVGELW 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00015 266 CDD ACT_UUR-ACR-like 164 231 - -
Pral4653g00015 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 125 IPR011598 GO:0046983
Pral4653g00015 266 Gene3D - 72 133 IPR036638 GO:0046983
Pral4653g00015 266 SMART finulus 82 131 IPR011598 GO:0046983
Pral4653g00015 266 Pfam Helix-loop-helix DNA-binding domain 80 125 IPR011598 GO:0046983
Pral4653g00015 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 128 IPR036638 GO:0046983
Pral4653g00015 266 PANTHER TRANSCRIPTION FACTOR BHLH30 43 258 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00015 Pral-Chr4653 90120 91481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00015 73 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 43.684 3.61e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4653g00015 HLH 4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00015 - - lja:Lj3g3v2848980.1 360.918