Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4653g00003 ATGGCGCAATTGCCTCCCAAGATCCCAAACATGGCGCCCAATTGGCCTGACTTTTCTTCTCATCAGAAGATGCCTTCCCTTGCAAGTTTGTCGCCAAATAATGTGGCTGCCGCCAACGCTGCTACCACCACCGCCCATCAGAATCCTTCTTGGGTGGATGAATTCCTCGACTTCTCGGCGGCCCGACGAGGGGCTCACCGGCGATCCGTGAGCGACTCCATTGCCTTCATTGAGGCGCCAATGCTGGACGATTCTCGTGGTAACTCCGGCGTGATTCCTCCGAGGCCTGGGGGTGACAATGAGTTCGATAGATTTGATGATGACCAATTCATGTCTATGTTCACCGACGATTTATCTGGAGCTCCCATGCCCCCCACCATGTCGTCCTCCAATCCTTCAAGCCCTTCTGATCATAACAGCATTAATGATGAGAAAGAAACCGGCCAAAACCAGAACCAACCGAAGGAGGAGAAGGAGAAGGAGCATGAGCAGCAGAAACAAGTGAAGAATGAATCAGATGAGGTTGAAAGCCAAAGCGAACAGGAAACTCAACCTCCAAATAACACCAATACAGCTTCTTCGACAGACAAAATTACTGACCCTAAGAGAGTGAAAAGAATCCTGGCAAACAGACAATCTGCACAAAGGTCACGAGTGAGGAAGCTGCAATACATATCGGAGCTTGAACGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTATCTCCAAGAGTTGCGTTTTTAGATCATCAACGATTGCTTCTAAATGTTGACAACAGTGCGCTGAAGCAAAGAATCGCCGCCCTTGCCCAGGACAAGATCTTTAAGGATGCTCATCAAGAGGCTCTAAAGAGGGAGATAGAGAGATTGAGGCAAGTATATCACCATCAGAATCTCAAGAAAATGGAAAATCCTGCAGGGCCACCATCACCATCCTCATCTCCAACACCGAACACAGAATGTGGTGGTGCTAAGACAGAAAAGGAACAATTTCTCAGTGTCTGA 1008 0.4831 MAQLPPKIPNMAPNWPDFSSHQKMPSLASLSPNNVAAANAATTTAHQNPSWVDEFLDFSAARRGAHRRSVSDSIAFIEAPMLDDSRGNSGVIPPRPGGDNEFDRFDDDQFMSMFTDDLSGAPMPPTMSSSNPSSPSDHNSINDEKETGQNQNQPKEEKEKEHEQQKQVKNESDEVESQSEQETQPPNNTNTASSTDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHHQNLKKMENPAGPPSPSSSPTPNTECGGAKTEKEQFLSV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4653g00003 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Pral4653g00003 335 FunFam Basic leucine zipper 61 201 274 - -
Pral4653g00003 335 Coils Coil 158 178 - -
Pral4653g00003 335 MobiDBLite consensus disorder prediction 83 204 - -
Pral4653g00003 335 MobiDBLite consensus disorder prediction 296 335 - -
Pral4653g00003 335 PANTHER BASIC LEUCINE ZIPPER 34 1 321 - -
Pral4653g00003 335 CDD bZIP_plant_RF2 203 253 IPR044759 GO:0003700|GO:0006355
Pral4653g00003 335 MobiDBLite consensus disorder prediction 1 27 - -
Pral4653g00003 335 MobiDBLite consensus disorder prediction 122 138 - -
Pral4653g00003 335 Gene3D - 201 274 - -
Pral4653g00003 335 SMART brlzneu 198 262 IPR004827 GO:0003700|GO:0006355
Pral4653g00003 335 MobiDBLite consensus disorder prediction 139 176 - -
Pral4653g00003 335 SUPERFAMILY Leucine zipper domain 202 256 IPR046347 GO:0003700|GO:0006355
Pral4653g00003 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 252 IPR004827 GO:0003700|GO:0006355
Pral4653g00003 335 MobiDBLite consensus disorder prediction 179 197 - -
Pral4653g00003 335 Coils Coil 281 301 - -
Pral4653g00003 335 Pfam bZIP transcription factor 202 245 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4653g00003 Pral-Chr4653 20028 23754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4653g00003 1 279 bZIP Transcription Factor Family AT3G58120 60.066 1.03e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4653g00003 bZIP_1 3.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4653g00003 - - qsa:O6P43_028875 422.165