Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4651g00041 ATGCTCGCGGTGTCACCTCTTAGAAGCACAAAAGATGAAGAAGGACAAGGAGAGATGGAGAGACTTTCGATGGAGTCCCATGAATTCGCTGACCTCTCCGATGGGAATCTATTGGAAAGCATCAACTTCGACGACATCTTTGTCGGCATCAACGTCGGTGATGTCCTACCGGATTTGGAAATGGACCCCGAGATCTTCGCCGAATTCTCTCTCAGCGCCGGCGAGGAATCGGAGATGGCCACCTCATCGGTCTCGTTGGAAAACGTCAATAATAAAGTTGACCAGAATATAACGACGTCGACGAAGAAAGGAGAAGAAGATAAGGTGTCCTCGGATTCGGGGTTCGGCTCGGGTTCCAATTCTGGAGAGGAGATAGTGAGCAAAAGGGATGAATCCGCGGTGGTGAAGCCGTCTCAGAAGGAAGCTGACAAGGGAAGAAAATCATCAGCGGAGTCAAAGAATTCTCAAGGGAAGAGAAAAGTGAAGGTGGACTGGACTCCAGAATTGCACAGACGATTCGTGCAAGCAGTGGAGCAACTAGGAGTAGATAAGGCGGTGCCTTCGAGAATTTTGGAAATCATGGGAATCGATTGTCTCACTCGCCATAACATAGCCAGCCATCTTCAAAAATATCGATCCCACAGGAAACACCTGTTGGCACGTGAAGCAGAAGCAGCAAACTGGAGTAAGAGAAGACAATGTTATGGTATAGGAGGAGGAGGAGGGAAGAGAGAGGGAAGCCCTTGGCTCCCAGTAGCACCGACAATTGGTTTCCCTCCGGTGACACCGCCGCCGCCAATGCAGCATTTTAGAGCCTTACATGTGTGGGGCCATCCCACCGTGGACCACTCCTTCTTGCCATTGTGGCCTAAGCATCTCCCTCCACACTCCCCTTCGCCGCCGCACCTCGCTTGGGCGCCTCCTGTCACTCCTCCGCCTCCTAATCCTTCCTATTGGCACCAACCGGCTCCCAATGCACTAACGCCAGGACCAGCTTGCTTTCCTCAGCCTCTGACTACAACGAGATTTCCCTCTCCTCCTGTCCCGGGTATTCCACCCCATGCCATGTACAAAGTAGATCCTGGCATTGGCGTCCCCACCAACCAACCCAGTCCTCGGCCATTCATTGATTCGCATCCATCAAAGGAGAGCGTAGATGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTGCCGCTTCCTCTTGGGCTTAAAGCTCCAGAGCTAGACAGCGTGATGGGTGAATTACAGAGACAAGGAGTTCCAAAAATTCCACCCTCGTGTGCTTGA 1290 0.5178 MLAVSPLRSTKDEEGQGEMERLSMESHEFADLSDGNLLESINFDDIFVGINVGDVLPDLEMDPEIFAEFSLSAGEESEMATSSVSLENVNNKVDQNITTSTKKGEEDKVSSDSGFGSGSNSGEEIVSKRDESAVVKPSQKEADKGRKSSAESKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAANWSKRRQCYGIGGGGGKREGSPWLPVAPTIGFPPVTPPPPMQHFRALHVWGHPTVDHSFLPLWPKHLPPHSPSPPHLAWAPPVTPPPPNPSYWHQPAPNALTPGPACFPQPLTTTRFPSPPVPGIPPHAMYKVDPGIGVPTNQPSPRPFIDSHPSKESVDAAIGDVLSKPWLPLPLGLKAPELDSVMGELQRQGVPKIPPSCA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4651g00041 429 MobiDBLite consensus disorder prediction 1 21 - -
Pral4651g00041 429 Pfam Myb-like DNA-binding domain 163 212 IPR001005 -
Pral4651g00041 429 MobiDBLite consensus disorder prediction 80 98 - -
Pral4651g00041 429 NCBIfam myb-like DNA-binding domain, SHAQKYF class 160 214 IPR006447 GO:0003677
Pral4651g00041 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 216 IPR017930 -
Pral4651g00041 429 SUPERFAMILY Homeodomain-like 158 217 IPR009057 -
Pral4651g00041 429 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 428 IPR044825 GO:0003700|GO:0045893
Pral4651g00041 429 MobiDBLite consensus disorder prediction 124 163 - -
Pral4651g00041 429 FunFam Two-component response regulator 156 219 - -
Pral4651g00041 429 Gene3D - 157 218 - -
Pral4651g00041 429 MobiDBLite consensus disorder prediction 80 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4651g00041 Pral-Chr4651 206316 210245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4651g00041 1 380 G2-like Transcription Factor Family AT5G44190 39.646 2.09e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4651g00041 Myb_DNA-binding 5.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4651g00041 - - cave:132183136 536.954