Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral4651g00028 | ATGGCCAAGGCTGGGTTTGGGACATCAGCAACTGACACAGGAAAAGGAAAAAGCAAAATGTCAAAGCATATCACACATGGCTTCCACTTAATGAAGGGAAAATCAGGCCATGCTATGGAAGATTATTTAGTTTCAGAATTTAAGCAAGAAAAGGACAAAGAGTTAGGATTGTTTGCTATATTTGATGGCCATTTGGGTCATGATGTTGCAAGCTACTTGCAGAACCACCTTTTTGACAACATCTTGAAACAGCCTGACTTCTGGAATGACCCAGAAAGTGCGGTAAGGAGAGCTTATCTTACAACAGACGAGGAAATATTGGGACAAGCACTTGTCTTGGGACGAGGAGGATCAACTGCAGTAACTGCAATACTGATTAATGGTCAGAAGCTCGTAGTAGGGAATGTTGGAGACTCTCGAGCTGTAATTTGCAAGAATGGAAAGGCAGAGCAACTATCAGTTGATCACGAGCCAAGCAAGGAAAAAAGGTTGATCGAGAGCCGTGGTGGTTTTGTGTCAAACATTCCAGGCGACGTCCCTCGTGTGGATGGACAGCTAGCAGTAGCCAGGGCTTTTGGTGATAAGAGCCTGAAGATGCATCTTAGTTCAGAACCTGATGTGGCGATCAAGGAGATAGAAGATGATACAGAATTCCTTATTCTGGCAAGTGATGGAATATGGAAGGTTGTGTCAAACCAAGAAGCAGTGGAGTCTATTAGACAAATAAAGGATGCTCAGGCTGCAGCGAAGCGTTTGATAGATGAGGCCGTTGCTAGGAAGAGCAAGGATGACATATCCTGCATTGTTGTGAGGTTCCAATGA | 822 | 0.4416 | MAKAGFGTSATDTGKGKSKMSKHITHGFHLMKGKSGHAMEDYLVSEFKQEKDKELGLFAIFDGHLGHDVASYLQNHLFDNILKQPDFWNDPESAVRRAYLTTDEEILGQALVLGRGGSTAVTAILINGQKLVVGNVGDSRAVICKNGKAEQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVAIKEIEDDTEFLILASDGIWKVVSNQEAVESIRQIKDAQAAAKRLIDEAVARKSKDDISCIVVRFQ | 273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral4651g00028 | 273 | FunFam | Probable protein phosphatase 2C 39 | 15 | 273 | - | - | |
| Pral4651g00028 | 273 | SUPERFAMILY | PP2C-like | 21 | 272 | IPR036457 | - | |
| Pral4651g00028 | 273 | Gene3D | - | 19 | 273 | IPR036457 | - | |
| Pral4651g00028 | 273 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Pral4651g00028 | 273 | SMART | PP2C_SIG_2 | 30 | 272 | IPR001932 | - | |
| Pral4651g00028 | 273 | ProSiteProfiles | PPM-type phosphatase domain profile. | 25 | 272 | IPR001932 | - | |
| Pral4651g00028 | 273 | CDD | PP2Cc | 26 | 272 | IPR001932 | - | |
| Pral4651g00028 | 273 | SMART | PP2C_4 | 20 | 270 | IPR001932 | - | |
| Pral4651g00028 | 273 | Pfam | Protein phosphatase 2C | 37 | 265 | IPR001932 | - | |
| Pral4651g00028 | 273 | Coils | Coil | 235 | 255 | - | - | |
| Pral4651g00028 | 273 | PANTHER | PROTEIN PHOSPHATASE | 20 | 272 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral4651g00028 | Pral-Chr4651 | 170797 | 173196 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral4651g00028 | 14 | 273 | PP2C-type Phosphatase Gene Family | AT4G28400 | 75.000 | 1.32e-144 | 404 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral4651g00028 | K17506 | - | gmx:100819846 | 455.292 |