Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4651g00026 ATGGATGAGACTAAACCAAAGACGGTGGTGGAGAGGGAGGCCTTGGGGGGTTACGAGGAGAAGAAAAATGGATTCTTCTGGGGGGAAGATGACCAGAGGAAGAAAGTGTCCGTCAAGAAAGGGTCTGCCGGCGGCGGAGGAAGTGGTATGCGGTGTTGCCAGGCGGAGAACTGCTCTGCGGAGCTCAGTGATGCGAAGCCGTATCATAAGAGGCACAAGGTGTGCGAATATCATGCCAAGGCTCAGGAAGTGGTCGTTTGCGGCATCCGACAACGTTTTTGCCAGCAATGCAGCAGGAGGCGTTTGGCTGGGCACAACGAACGACGAAGGAAGAACTCAGTGGGTGAGGCTCAGGCAGAAGGGTCGGGCCAGAAAAGAACAGGAACTCATCAGCTGAAGGACGGGGTTTGTGGTGATGATAGAACCAGAATCCAGATCACTATATAA 447 0.5369 MDETKPKTVVEREALGGYEEKKNGFFWGEDDQRKKVSVKKGSAGGGGSGMRCCQAENCSAELSDAKPYHKRHKVCEYHAKAQEVVVCGIRQRFCQQCSRRRLAGHNERRRKNSVGEAQAEGSGQKRTGTHQLKDGVCGDDRTRIQITI 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4651g00026 148 MobiDBLite consensus disorder prediction 105 136 - -
Pral4651g00026 148 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 36 120 IPR044817 GO:0003677
Pral4651g00026 148 Gene3D - 43 134 IPR036893 GO:0003677|GO:0005634
Pral4651g00026 148 ProSiteProfiles Zinc finger SBP-type profile. 50 112 IPR004333 GO:0003677
Pral4651g00026 148 Pfam SBP domain 53 110 IPR004333 GO:0003677
Pral4651g00026 148 SUPERFAMILY SBT domain 51 115 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4651g00026 Pral-Chr4651 164712 166130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4651g00026 33 125 SBP-box Gene Family AT1G53160 50.000 4.39e-27 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pral4651g00026 SBP 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4651g00026 - - cave:132181263 145.591