Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4651g00015 ATGGATCATCAGCAACGAGTTCAAGCTCCATCGCACACCAAGATCGAAAGAAGGCTCATAGAGAAAAACCGGAGAAACCAGATGAAGATCCTCTACTCCAAACTCAACTCTCTTCTCCCAAACTTCAACCCTAAGCAAATGATTCCACTGCCTGATCAGATAGACGAGGCCATAAACTATATAAAGAGTTTAGAGGCAAAGGTGAAGATGGCTCAGGAGAAGAAAGAGAAGTTAATGGGAAAGAAAAGGTCTCATGCTTGTTGCAGCTCCAGTTCTTTTGAGACAAAGAGAAGCCGAAATTCACCCCAAATTCAGATTCACGAAATGGGTTCGTCGCTGGAAGTAGTCCTGATTAATGGTTTGGATAATCAGTTCATTTTCTATGAGATTATTTGCATACTGCACGAAGAGAACGTGGAGGTTGTAAGTGCCAATTCTTCACTCGCCGGAGATTCAATGCTAAACGTTGTGCACGCACAGATTCAGCCATCTCTGTATGAATTCGGAGCTACCAAAGTAACCGAAAGATTGAAAAGGTTTGTGTATGGTTCCGCCAGTGACGTAGAATTACAGCCAGCCGAGCTGCAAGATTACTTCCAAATTGATCAAAGTTTTGGTTTGCTCATGTCAAAGAACATTGCCATATTGTTCAGCTGTGATATACATCTCCCGCGGTTGCGCCTTTTTGGCCATATGAGACATAACCATTATATCACACCAAAATCTATTGGAGATCAGAAGACATATCCTTTGGCTGTATAG 762 0.4239 MDHQQRVQAPSHTKIERRLIEKNRRNQMKILYSKLNSLLPNFNPKQMIPLPDQIDEAINYIKSLEAKVKMAQEKKEKLMGKKRSHACCSSSSFETKRSRNSPQIQIHEMGSSLEVVLINGLDNQFIFYEIICILHEENVEVVSANSSLAGDSMLNVVHAQIQPSLYEFGATKVTERLKRFVYGSASDVELQPAELQDYFQIDQSFGLLMSKNIAILFSCDIHLPRLRLFGHMRHNHYITPKSIGDQKTYPLAV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4651g00015 253 Gene3D - 2 90 IPR036638 GO:0046983
Pral4651g00015 253 Coils Coil 54 81 - -
Pral4651g00015 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 64 IPR011598 GO:0046983
Pral4651g00015 253 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 13 182 - -
Pral4651g00015 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 87 IPR036638 GO:0046983
Pral4651g00015 253 SMART finulus 18 70 IPR011598 GO:0046983
Pral4651g00015 253 FunFam Transcription factor bHLH162 5 90 - -
Pral4651g00015 253 Pfam Helix-loop-helix DNA-binding domain 16 65 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4651g00015 Pral-Chr4651 104166 105688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4651g00015 10 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.022 1.90e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4651g00015 HLH 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4651g00015 - - gmx:100817883 259.225