Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4651g00008 ATGGGTTGCATATGCTCCAAGACCTCAGCTGTGGAGGACAGCCGAGAAGGTTTGACAACGAAATTGTCGTCATTGAGCAAAAGGTCATCGGAGCTGAATGTTTCACGATTGAATTCATCAAAAAGGGATGAGGGAGTTTGGACCAAGAATGTGATAGATGCCAGAGATGTAAAAGTTTCGTTGATTAGCAAGAAACCCAATGGTTCAGTGACGTTTTATGATGATCGAATTGGAGAGGAGAAAAGTGAGAAACCCGAATTTCCCGTTCTTAATCATCCTGGTCTTGGTAAAGTACCAAAGGCTACAGAAGGAGAACAAGTTGCGGCAGGATGGCCAGCTTGGCTATCTTCTGTTGCTGGTGAAGCTATCAAGGGATGGATACCTCGGAGTGCTAATACTTTCGAGAGGTTATATAAAATTGGCCAAGGAACATACAGTTCTGTTTACAAGGCACGTGATGTGACTCACCAAAAGACAGTTGCTTTGAAGAAAGTACGATTTGATAATCTTGATCCTGAGAGTGTCAGGTTTATGGCAAGAGAAATTTTTGTTCTGCGTTGGCTTGACCATCCTAACGTGATAAAGTTAGAGGGCTTGATAACATCCCAGGCATCCCGTAGCTTGTACCTTGTTTTTGAGTACATGGAACATGATCTTACAGGACTTGCTTCACGTCCTGGCATTAAATTTTCAGAACCACAGATTAAGTGCTACATGCAACAGCTTCTCAGTGGATTGGATCATTGTCATAGTCATGGTGTTCTCCACCGGGATATAAAGGGGTCAAATCTTCTTATTGGCAATAATGGCATCTTAAAGATTGCAGATTTTGGTTTGGCAAGCTTTTTTGACCCCCATCAAAGTGTTCCATTGACCAGCCGAGTGGTGACTCTTTGGTATAGGCCTCCAGAACTTTTACTTGGAGCATCTCATTATGGTGTTGCGGTGGATTTGTGGAGCACTGGCTGTATACTGGGGGAACTGTATTCTGGCAAGCCCATATTGCCAGGAAAAACAGAGGTGGAACAATTGCATAGGAGTTTTAAGCTTTGTGGCTCACCATCTGAAGATTACTGGCTTAAATTGCGGTCGCCACATTCAACAATATTCAAGCCTCCGCATCATTATAGGCGTTGTGTTGCGGAAACATTCCAGGAATATCCACCTGCTGCTGTGAGGCTAATAGAGACCCTACTTTCAATAGATCCTGCACATCGAGGAACTGCAGCTGCTGCCTTAAAAAGTGAGTTCTTTACCGTGGAACCCCTTGCTTGTGATCCTTCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGACGCTAAGATGCGAGATGAAGCAACCAGAAGGCAAAGAGCTGTAGGAGGAAGGGAGCAGAAAGTTGGGGTGGGAGTTGGACCAGAAAAAGGGCTTCAGGCGCTTGCGGCAAATAACAATGCTAACCCGCGCTTGTCAATGCAGCAAGGACGTCATTCCAGTTCAAAGAGTCGAACTGAATTGTTCAATCCTCCCAGAGAATCTGCTTCGGGGTTGTTGGTTTTTCCACATAAACAGTCAGACAATGCTGAGGAAGTGGAAAATAATTTCTCTGGTCATCTATACAAGAGGCCTTCACATTCAGGTCCATTGGTTCAGGGTCCAGGCCGGGTAAAAGTTGGTAAGGACATGGACGAGCAGCATCTTGGTTCAAACAGAGTCAACTTGTCAAAGGTATTAGGTTTAGTTGCATCTAGGACTTCAGTGTCTGAAGATCAGGAGGAAAAATCACATTTCTCACGGCCCAGAAAAACAGTTGATGTACAAAAACCTGTGGAGTCAACTAGGGGATCAGATTTAAGAAGGCAGGCTCAAAAACACCAGTCTCAGCGAGTTGATTTGTGTCACGTAGAACATGGAAGGACCCCTGCTAAAGAATCAACTCCGGAAGGGTACGCCAGAGGAAACAAGATCTATCTTTCTGGTCCATTGATGGTATCGTCAAACAACATGGATCAGATGCTCAAAGAACATGATCGAAAGATCCAGGAATATTCAAGACGAGCTAGAATTGACAAGTCAAAAGGTGAAAAAGTTCGTGCGAAGCAAAAGTAG 2091 0.4424 MGCICSKTSAVEDSREGLTTKLSSLSKRSSELNVSRLNSSKRDEGVWTKNVIDARDVKVSLISKKPNGSVTFYDDRIGEEKSEKPEFPVLNHPGLGKVPKATEGEQVAAGWPAWLSSVAGEAIKGWIPRSANTFERLYKIGQGTYSSVYKARDVTHQKTVALKKVRFDNLDPESVRFMAREIFVLRWLDHPNVIKLEGLITSQASRSLYLVFEYMEHDLTGLASRPGIKFSEPQIKCYMQQLLSGLDHCHSHGVLHRDIKGSNLLIGNNGILKIADFGLASFFDPHQSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELYSGKPILPGKTEVEQLHRSFKLCGSPSEDYWLKLRSPHSTIFKPPHHYRRCVAETFQEYPPAAVRLIETLLSIDPAHRGTAAAALKSEFFTVEPLACDPSSLPKYPPSKEIDAKMRDEATRRQRAVGGREQKVGVGVGPEKGLQALAANNNANPRLSMQQGRHSSSKSRTELFNPPRESASGLLVFPHKQSDNAEEVENNFSGHLYKRPSHSGPLVQGPGRVKVGKDMDEQHLGSNRVNLSKVLGLVASRTSVSEDQEEKSHFSRPRKTVDVQKPVESTRGSDLRRQAQKHQSQRVDLCHVEHGRTPAKESTPEGYARGNKIYLSGPLMVSSNNMDQMLKEHDRKIQEYSRRARIDKSKGEKVRAKQK 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4651g00008 696 Coils Coil 660 680 - -
Pral4651g00008 696 MobiDBLite consensus disorder prediction 665 696 - -
Pral4651g00008 696 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Pral4651g00008 696 CDD STKc_CDK9_like 134 418 - -
Pral4651g00008 696 Gene3D Transferase(Phosphotransferase) domain 1 217 456 - -
Pral4651g00008 696 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Pral4651g00008 696 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4651g00008 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Pral4651g00008 696 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4651g00008 696 MobiDBLite consensus disorder prediction 479 503 - -
Pral4651g00008 696 MobiDBLite consensus disorder prediction 581 626 - -
Pral4651g00008 696 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Pral4651g00008 696 MobiDBLite consensus disorder prediction 662 696 - -
Pral4651g00008 696 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Pral4651g00008 696 PANTHER CELL DIVISION PROTEIN KINASE 132 423 - -
Pral4651g00008 696 MobiDBLite consensus disorder prediction 479 507 - -
Pral4651g00008 696 MobiDBLite consensus disorder prediction 578 626 - -
Pral4651g00008 696 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4651g00008 696 SUPERFAMILY Protein kinase-like (PK-like) 128 420 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4651g00008 Pral-Chr4651 40650 47022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4651g00008 126 459 Core Cell Cycle Gene Families AT5G10270 49.143 6.14e-108 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral4651g00008 Pkinase 7.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4651g00008 - - gmx:100807590 979.548