Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4651g00003 ATGGAGCCTTTGCTCAAAGGCGAAAGCAGTGGTCAGAGGATGCCATCGCCGGGGTTATTCCTTCATCGCTCGCATGCTATCGCTTACGGTTCGCCCACCGTGAAAGCGGCTGCACTTGTCGATCTGGCTGAAGACGGCGTCGGCATCCCAGAGCAAGTACTCGATTCGTCGAGTTTTCAGAGCTCCGCTAGATTTTATTTCATGTTTACTAAATTAAACTTTATATGGTCACTTGGTTACTTTGCTCTGCTAGTCCTGAATTTCCTTGAGAAACCCTTGTGGTGTGACAAGTATACCGCTTATTCTTGCGACGATAGAGAGCATTTCTTTCTGGGACAACTGCCATATCTAACTGGTACAGAATGTGTTATTTATGAGGGTATAACTCTCATTGTGCTTATCGTACATACTTTTTTCCCAATATTCTATGAAGGCTCCTGGATATATTGGAAAAAAACTCTTAATCAATTGAAGGTACTGTGTCTGTTAGTTCTGGTTGCTGATATGGTGGTTTATGCTCTGTATTTGTCTCCGGTGACTTATTATTCTCTACCTGTCAGATTTGCACCTTATGTCAGGGTTATTCTTTTCATTTTACATATTAGGGAATTACGAGCAACCATTACCATCTTGGCTGGAATGCTTGGCACATACCTGAATGTCCTGGCTCTGGGGCTTCTGTTCCTTCTTTTCTCAAGTTGGGTGGCCTATGTGATGTTTGAAGATACAGAACAGGGAAAATTAGTATTCAGTTCCTATGGCACCACATTATATCAGCTGTTTGTTTTATTTACCACATCCAATAATCCAGATGTTTGGATTCCTGCATACAAGGCTTCACGTTGGTATTGCCTGTTTTTTGTTCTCTTCGTGCTGCTGGGGGTATATTTTGTCACAAACTTGGTCCTCGCCGTTGTTTATGACAGTTTCAAGAGCGAGCTTGCAAAACAAGTTTTCGAGATGGATCGAATGAGAAGAAATATGCTGGGGAAAGCATTTGATCTATTGGATCAGGATAATGTTGGGTATCTTAACAAAAACCAATGCATTCAACTCTTTCAGGAGCTGAACAAGTACAGGACTCTGCCAAATATCTCCCGGGAAGAATTTGAGTTGATATTTGATGAGCTGGATGATAGTCATGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGCAACGCCATTGCTTTGAAGTTTCAGAAGGAAGACACTCCATCTTATTTTGAGTATTGTTCATTCTACCACGCTCCCACCTCCAAGAATTTGAAAGCATTTGTGCGGAGCCCAAAGTTTGGATACCTAATATCTTTCATTCTTATATTGAATCTGATTGCTGTTATAACTGAGACAACGCTTGATATACAAAATAATTCTGCTCAAAAGGTGTGGCAAGTGGTTGAGTTTGTTTTTGGCTGGATATATGTAATAGAAATGGCTTTAAAAGTCTATTCATATGGATTCGAGAATTATTGGCGGGATGGTCAAAATCGCTTTGACTTTATCATCACATGGGTAATTGTCATTGGAGAAACTATAACTTTTGTTACACCTGAAGGACTGTCTTTTTTCTCAAATGGAGAATGGATTCGGTACCTTCTTCTTGCAAGAATGTTGAGGTTGATAAGACTCCTAATGCATGTCCAGCAATATCGAGCCTTTGTGGCAACCTTCCTAACTCTCATACCAAGTTTGATGCCATACCTTGGAACCATATTTTGTATCTTGTGTATTTATTGCTCCCTTGGTGTGCAGATCTTTGGCGGAATTGTCAATGCTGGAAATCCCAAATTGGAAGCGACAGGTCTTGCTGACAATGACTATCTGCTCTTTAATTTTAACGATTATCCAAGTGGGATGGTTACACTTTTCAATTTGGTAGTCATGGGAAACTGGCACATATGGATGCAGAGCTACAAGGAATTAACGGGGACTTCTTGGAGCTATCTTTACTTTATTAGCTTCTACCTAATAACTATTCTACTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGACGTCTGCTGATACTAGAGAAGACGACAAGGAAGGTGAAGGAGGGAGACATCGAAGACGACTTGTTGGCACCAAAACACGTAGCCAAAGGGTTGATGCTCTCCTTCATCATATGTTGAGCTCTGAGTTATGTGAAGCACAGCCTACCGATCCATAA 2205 0.4082 MEPLLKGESSGQRMPSPGLFLHRSHAIAYGSPTVKAAALVDLAEDGVGIPEQVLDSSSFQSSARFYFMFTKLNFIWSLGYFALLVLNFLEKPLWCDKYTAYSCDDREHFFLGQLPYLTGTECVIYEGITLIVLIVHTFFPIFYEGSWIYWKKTLNQLKVLCLLVLVADMVVYALYLSPVTYYSLPVRFAPYVRVILFILHIRELRATITILAGMLGTYLNVLALGLLFLLFSSWVAYVMFEDTEQGKLVFSSYGTTLYQLFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLVLAVVYDSFKSELAKQVFEMDRMRRNMLGKAFDLLDQDNVGYLNKNQCIQLFQELNKYRTLPNISREEFELIFDELDDSHDVKINKDEFADICNAIALKFQKEDTPSYFEYCSFYHAPTSKNLKAFVRSPKFGYLISFILILNLIAVITETTLDIQNNSAQKVWQVVEFVFGWIYVIEMALKVYSYGFENYWRDGQNRFDFIITWVIVIGETITFVTPEGLSFFSNGEWIRYLLLARMLRLIRLLMHVQQYRAFVATFLTLIPSLMPYLGTIFCILCIYCSLGVQIFGGIVNAGNPKLEATGLADNDYLLFNFNDYPSGMVTLFNLVVMGNWHIWMQSYKELTGTSWSYLYFISFYLITILLLLNLVVAFVLEAFFAEMELETSADTREDDKEGEGGRHRRRLVGTKTRSQRVDALLHHMLSSELCEAQPTDP 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4651g00003 734 ProSiteProfiles EF-hand calcium-binding domain profile. 324 359 IPR002048 GO:0005509
Pral4651g00003 734 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Pral4651g00003 734 FunFam Two pore calcium channel protein 1 203 314 - -
Pral4651g00003 734 Gene3D - 310 394 - -
Pral4651g00003 734 SUPERFAMILY EF-hand 315 397 IPR011992 -
Pral4651g00003 734 SMART efh_1 369 397 IPR002048 GO:0005509
Pral4651g00003 734 SMART efh_1 328 356 IPR002048 GO:0005509
Pral4651g00003 734 FunFam Two pore calcium channel protein 1 423 555 - -
Pral4651g00003 734 Gene3D - 556 715 - -
Pral4651g00003 734 Gene3D - 203 309 - -
Pral4651g00003 734 FunFam Two pore calcium channel protein 1 556 713 - -
Pral4651g00003 734 Pfam EF-hand domain pair 329 393 IPR002048 GO:0005509
Pral4651g00003 734 Gene3D - 423 555 IPR027359 -
Pral4651g00003 734 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 3 730 IPR044581 GO:0005245
Pral4651g00003 734 CDD EFh 328 393 IPR002048 GO:0005509
Pral4651g00003 734 SUPERFAMILY Voltage-gated potassium channels 430 676 - -
Pral4651g00003 734 Pfam Ion transport protein 126 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral4651g00003 734 Pfam Ion transport protein 433 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4651g00003 2 730 Ion Channels AT4G03560 68.082 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4651g00003 K16900 - qsa:O6P43_028812 1107.43