Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4650g00001 | ATGGCCACGGCGAGTAACAGTGGCAAATCCACCGTGGGTGGTGGAGAAAGCCGAGATTGGGAGATTGGCAGGGGTAAAGATGTAGACTTGAGCGGTGAGAGGCGGCAATGGAAGCCAGTTTTTGAGGATGCTTCCGTGTCGAACAGGCCTCTGAAGAAAAGCCGAAGCCCCCAACGTGAAAACTCAAACCAAAATCAATCCTCCGTTCCCATTCTACCACATCCTCCTTCGTCTTCGAGAATCGTCTTCCCTTTTGCCTTCGATGGTTCTCAACAGCCTCTGCAATTTCCCTATCAACAATTTGGCTCTCCCAATTTGCCTGCGTTTCGCCCACAGTTTCTCGGGACGCAAAATCAGCAGCAGATGATTTCTTTTGGGTCTCAACAGCCAAACATGGGGTACCCACAGTTCTTAGGCCAAGACTCTGGAGTCGCACACCAGCAACATCATCATCAGCAACAGCAGCAACATCTTCAGTATTGCAGAGACCCGTTGAATCTGAGTCCAAGAGGGAGGATGATGATGATGATGATGAACAGCGTAGGGCCGGACGGAAGGCCATTGTACAGGCCCCCTCCTCAGCCTATAAATACTACTAAGCTCTACAGAGGGGTGAGGCAACGTCATTGGGGAAAATGGGTCGCTGAGATTCGTCTTCCTCGCAACAGGACTCGCCTCTGGCTGGGAACATTCGACACAGCTGAAGATGCCGCCTTGGCTTATGATCGCGAGGCCTTTAAGTTGAGAGGAGAGAATGCTAGGCTCAATTTCCCCGAGCTTTTCCTCAATAAGGACAAGCCATCCTCAACAGTCCCAGATTCATCTGCTTCTTCTCCCTCCACTCGTCAACAAGGTTCAACGTCGAAGCAAACTAACTCTGCTCCAGAAGGTTTTACTGCGGAAGCTCCGATTGCAGAGGAGAAGCCTTCGCGACCGCCACCGGAAGAGAGCACCGACAATGATTCTGGAATAGGGTCAAGTGAAGCTACAATGAGCGACGAAGTACAGGCTGCGTCTAATGCTGGAACAGGGGAGGGAACTTCGGCGTCGCAAGAACTGGTCTGGGGAGAAATGGCGGCTTGGTTCAATGCAATTCCAGCGGGTTGGGGTCCCGGTAGCCCTGTGTGGGATGATTTGGACACATTTCAGTCGCAACTTGCCTTTTTCAATCCCAATCACCAAGAATCTAATAATGCAGATACTCACATGCAGCAAGAAGATATTACAGGACCATCAGATTCTTCCACTTCCTCCTCTTGTCCCGTGAAACCCTTCTTCTGGAAAGTGAATGTGCGGTAG | 1299 | 0.5089 | MATASNSGKSTVGGGESRDWEIGRGKDVDLSGERRQWKPVFEDASVSNRPLKKSRSPQRENSNQNQSSVPILPHPPSSSRIVFPFAFDGSQQPLQFPYQQFGSPNLPAFRPQFLGTQNQQQMISFGSQQPNMGYPQFLGQDSGVAHQQHHHQQQQQHLQYCRDPLNLSPRGRMMMMMMNSVGPDGRPLYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKPSSTVPDSSASSPSTRQQGSTSKQTNSAPEGFTAEAPIAEEKPSRPPPEESTDNDSGIGSSEATMSDEVQAASNAGTGEGTSASQELVWGEMAAWFNAIPAGWGPGSPVWDDLDTFQSQLAFFNPNHQESNNADTHMQQEDITGPSDSSTSSSCPVKPFFWKVNVR | 432 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4650g00001 | 432 | SMART | rav1_2 | 201 | 264 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4650g00001 | 432 | SUPERFAMILY | DNA-binding domain | 201 | 259 | IPR016177 | GO:0003677 | |
Pral4650g00001 | 432 | ProSiteProfiles | AP2/ERF domain profile. | 201 | 258 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4650g00001 | 432 | Gene3D | AP2/ERF domain | 201 | 259 | IPR036955 | GO:0003700|GO:0006355 | |
Pral4650g00001 | 432 | MobiDBLite | consensus disorder prediction | 263 | 327 | - | - | |
Pral4650g00001 | 432 | MobiDBLite | consensus disorder prediction | 267 | 297 | - | - | |
Pral4650g00001 | 432 | CDD | AP2 | 200 | 260 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4650g00001 | 432 | Pfam | AP2 domain | 202 | 250 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4650g00001 | 432 | MobiDBLite | consensus disorder prediction | 19 | 40 | - | - | |
Pral4650g00001 | 432 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Pral4650g00001 | 432 | MobiDBLite | consensus disorder prediction | 392 | 420 | - | - | |
Pral4650g00001 | 432 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 18 | 379 | - | - | |
Pral4650g00001 | 432 | PRINTS | Ethylene responsive element binding protein signature | 224 | 240 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4650g00001 | 432 | PRINTS | Ethylene responsive element binding protein signature | 202 | 213 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4650g00001 | 432 | FunFam | Ethylene-responsive transcription factor 2 | 200 | 259 | - | - | |
Pral4650g00001 | 432 | MobiDBLite | consensus disorder prediction | 57 | 74 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4650g00001 | Pral-Chr4650 | 5087 | 7347 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4650g00001 | 1 | 378 | AP2-EREBP Transcription Factor Family | AT2G20880 | 40.874 | 4.99e-63 | 205 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral4650g00001 | AP2 | 3.1e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4650g00001 | - | - | qsa:O6P43_028790 | 502.286 |