Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral464g00006 CTTAGCAAACGTACTACTACAGAAAAGCTACGGGAGGCATTTTCCCAGTTTGGTGAAGTTGTTAATGCTAGAGTGGTTACTGACAGAGTATCAGGTTACTCTAAAGGGTTTGGCTTTGTAAGATATGCCACCGTAGAAGAAGCTGCAAAAGGCATTGAGGGCATGGATGGAAAGTTTCTGGATGGTTGGGTGATATTTGCGGAGTATGCAAGACCAAGACCACCACCGGGACAACCTGGACAACCTATGCCTCCTCCGTATGGCCAGCAGTACTAA 276 0.4674 LSKRTTTEKLREAFSQFGEVVNARVVTDRVSGYSKGFGFVRYATVEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPGQPMPPPYGQQY 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral464g00006 91 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 72 IPR000504 GO:0003723
Pral464g00006 91 PANTHER NUCLEOLAR PROTEIN 8 1 85 - -
Pral464g00006 91 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 62 IPR000504 GO:0003723
Pral464g00006 91 MobiDBLite consensus disorder prediction 71 91 - -
Pral464g00006 91 SMART rrm1_1 1 68 IPR000504 GO:0003723
Pral464g00006 91 Gene3D - 1 91 IPR012677 -
Pral464g00006 91 MobiDBLite consensus disorder prediction 72 91 - -
Pral464g00006 91 SUPERFAMILY RNA-binding domain, RBD 1 88 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral464g00006 Pral-Chr464 31961 33149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral464g00006 1 74 Eukaryotic Initiation Factors Gene Family AT3G11400 37.838 4.27e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral464g00006 - - jre:109014290 135.961