Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4649g00059 ATGCTGTGTCATGTAGCACCAGAGCTGTTACTAAAGAGCAACACATACTTTAAAGATTCAGGCACCAATACCATGGAGACTGTTTTTTCCAAGATGTTTCCCCCAGTGGCATTGAAGGGCCAGCAGATTGAATATAATCCGGAGGAACTTGATGAATTGCTGGGACAGGTTGAAATATGGCACTACATGACCAGCTTCACCGACTCCGTCGCCCTCAAAGTTGCGGTGGAGCTCCGCATAGCTGACATTATCGACCGCCATGGCCAACCCATGACCCTTCAAAAGATCATCGACAACATCGACGGTGCTACCGACCCTGAAATCACCTTCCTCTTTCGTGTCATGCGAGTTCTTGTCCGCCGAAAGATCTTCTCCGCCCAACAAACCGACTCCGGCGAGACCCTTTACGGCTTGACCCGTGCTTCCAAATGGCTCCTCCGTGACACCAAAATGACCCTCTCCCCCATGCTTCTCCTCGAGAACCACCCCATCCACCTGAACCCCGCTCACTACATTAGCCAATGCATCAAAGAAGGCACTAAAAACGGCACTGCTTTTTTCAAGTGCCATGGCCACGAGCAATTCGACCTCACCGGTTTGGACCCCGAGTACAATAAGTTGTTCAACGAGGGCATGGTCTGCACCGCTAGGGTTACGTCCAAGGCTGTTATTTCGGGCTACAAGGATGGTTTCAACAAGATCCATTCCTTGGTGGACGTAGGAGGCGGCATCGGAGGATCACTCTCTGAGATTGTTCGAGCTAACCCCCACATCAAAGGCATCAACTTTGATCTTCCCCACGTGGTCGCCACTGCACCAAAATACGACGGAATCACTCACGTCGGGGGAAACATGTTCGAGTCCATCCCTGAAGCCGACGCTATCTACATGAAGTGGATTTTGCATGACTGGAGCGACCAGCACTGCATTCAGATATTGAAGAACTGCAGAAAAGCGATCCCCGAGAAGACAGGGAAAGTGATAATAGTGGACCATGTTCTGCAACCGGAAGGCAACAACGGGCTGTTCGACGAGGTAGGGTATGCATTTGACATGATGCTGCTGGCTCACAACGCTGGTGGAAGGGAAAGGACTGAGCAGGACTGGAAGAGGCTGTTCGAAGAAACTGGCTTCCCTCGGTACAACATCATCAAGATCAAGGCTCTCCAATGCATCATCGAGGCCTTCCCAATCTGA 1197 0.5113 MLCHVAPELLLKSNTYFKDSGTNTMETVFSKMFPPVALKGQQIEYNPEELDELLGQVEIWHYMTSFTDSVALKVAVELRIADIIDRHGQPMTLQKIIDNIDGATDPEITFLFRVMRVLVRRKIFSAQQTDSGETLYGLTRASKWLLRDTKMTLSPMLLLENHPIHLNPAHYISQCIKEGTKNGTAFFKCHGHEQFDLTGLDPEYNKLFNEGMVCTARVTSKAVISGYKDGFNKIHSLVDVGGGIGGSLSEIVRANPHIKGINFDLPHVVATAPKYDGITHVGGNMFESIPEADAIYMKWILHDWSDQHCIQILKNCRKAIPEKTGKVIIVDHVLQPEGNNGLFDEVGYAFDMMLLAHNAGGRERTEQDWKRLFEETGFPRYNIIKIKALQCIIEAFPI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4649g00059 398 Gene3D - 43 145 IPR036388 -
Pral4649g00059 398 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 395 IPR029063 -
Pral4649g00059 398 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 60 397 IPR016461 GO:0008168
Pral4649g00059 398 Pfam Dimerisation domain 71 119 IPR012967 GO:0046983
Pral4649g00059 398 Pfam O-methyltransferase domain 172 378 IPR001077 GO:0008171
Pral4649g00059 398 PANTHER O-METHYLTRANSFERASE 59 380 IPR016461 GO:0008168
Pral4649g00059 398 PIRSF O-mtase 39 398 IPR016461 GO:0008168
Pral4649g00059 398 Gene3D Vaccinia Virus protein VP39 147 398 IPR029063 -
Pral4649g00059 398 SUPERFAMILY "Winged helix" DNA-binding domain 55 148 IPR036390 -
Pral4649g00059 398 CDD AdoMet_MTases 237 334 - -
Pral4649g00059 398 FunFam O-methyltransferase family protein 147 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4649g00059 Pral-Chr4649 311560 318343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4649g00059 70 398 Monolignol Biosynthesis Gene Families AT5G54160 37.126 1.15e-75 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4649g00059 K22588 - gmx:100800801 604.364