Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4649g00054 ATGGGGTGTTGTGTCTCAACAAGCAGTAGGAGTACATGTAGTAGCGGAAGCAATGGAAACACGGTTTTGCGATCTTGTTTTGAAATTGGGTTCAATGGGCAGAAGAGAACACGGAGAACATTCTGTGATAATGTTATTTCCCTGAAACATTTACATTCTGTCCCAAACAGAATTTTTATGAATGGAAAGAGCCGCACTTCTTGCATATTTACGCAGCAGGGGCGGAAGGGCATCAACCAGGATGCCATGATCGTTTGGGAAGATTTCATGTCAGAAGATGTGATTTTTTGTGGTGTCTTTGATGGCCATGGTCCTCACGGTCATCTTGTTGCACGCAAGGTGAGGGATGCCCTGCCAATAAAACTACTCTCATTTTTGCATTCGTGTGAATCAAAGCAAACTGGACCAGGTAAGGCCTGCTTCAAAGGGAACTTAAAGCCTGATGGGGAAGACTCTGAGAAGGATTGTTCTGCTGAAGACAAACTGAATTCCTTATGGCAAGAGGCCTTCTTGAAGGCATACAAGGCTATGGACAAAGACCTGAAGTCTCATCCAAATTTGGACTGTTTCTGTAGTGGGAGCACTGCTGTCACTTTAGTGAAGCAAGGCTCAAATCTGTTCGTGGCCAATATTGGGGATTCTCGAGCAATTATGGGATCCAAGGATAGCAACGGTTCCACGATAGCAATTCAGCTGACTGTTGATTTGAAGCCTGATTTGCCAAAGGAAGCAGAAAGGATCAAACGGTGTAAGGGTAGGGTATTTGCTTTGCAGGATGAGCCAGAAGTGTGTAGGGTGTGGTTGCCTTTTGATGATGCACCTGGACTAGCTATGGCTCGAGCATTTGGAGACTTCTGCTTGAAGGAGTACGGGGTGATATCTATTCCTGAATTTTCTCACCGTCTTCTTACAGACAAAGATCAGTTCATTGTTATTGCCTCAGATGGGGTTTGGGACGTGTTAAGCAATAAAGAAGTGGTTGAGATTGTATGTTCAGCGCCATCACGGTCATCAGCAGCACGGATTGTGGTGGATTCTGCAGCTCGAGAGTGGAAACTGAAGTATCCAACTTCAAAGATGGATGATTGTGCTGTGGTGTGCCTATTTTTGGACGGGAAAATGGATGCAGAATCTGACTATGATGATCAAGGCTTCTCTTCTGCCACCGTCCTGAGCAACCATTCGGGAAATCCGATTGAATCAGACGATGGGCAAAAGTCGGAGCCTTCTTTGCAGAGAAACTTCACGGTGAGGTCCTCAGACGAAAAAGAGACATACAGCGGCCTAACAGCTGATGTGGAAGGCGAACCACCCTCAGCTCAAGATCAGAACTGGTTAGGCTTGGAAGGTGTGACCCGGGTGAACTCGTTGGTTCAACTTCCTAGATTTTCTGAGGAAAGACCAAACCCTTGA 1413 0.46 MGCCVSTSSRSTCSSGSNGNTVLRSCFEIGFNGQKRTRRTFCDNVISLKHLHSVPNRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVIFCGVFDGHGPHGHLVARKVRDALPIKLLSFLHSCESKQTGPGKACFKGNLKPDGEDSEKDCSAEDKLNSLWQEAFLKAYKAMDKDLKSHPNLDCFCSGSTAVTLVKQGSNLFVANIGDSRAIMGSKDSNGSTIAIQLTVDLKPDLPKEAERIKRCKGRVFALQDEPEVCRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVIASDGVWDVLSNKEVVEIVCSAPSRSSAARIVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDAESDYDDQGFSSATVLSNHSGNPIESDDGQKSEPSLQRNFTVRSSDEKETYSGLTADVEGEPPSAQDQNWLGLEGVTRVNSLVQLPRFSEERPNP 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4649g00054 470 CDD PP2Cc 72 370 IPR001932 -
Pral4649g00054 470 SUPERFAMILY PP2C-like 55 372 IPR036457 -
Pral4649g00054 470 SMART PP2C_4 55 368 IPR001932 -
Pral4649g00054 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Pral4649g00054 470 MobiDBLite consensus disorder prediction 387 447 - -
Pral4649g00054 470 Pfam Protein phosphatase 2C 146 336 IPR001932 -
Pral4649g00054 470 Gene3D - 56 372 IPR036457 -
Pral4649g00054 470 FunFam probable protein phosphatase 2C 52 57 373 - -
Pral4649g00054 470 PANTHER PROTEIN PHOSPHATASE 66 368 IPR015655 GO:0004722|GO:0006470
Pral4649g00054 470 MobiDBLite consensus disorder prediction 387 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4649g00054 Pral-Chr4649 278234 282949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4649g00054 1 468 PP2C-type Phosphatase Gene Family AT1G03590 68.211 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4649g00054 - - gmx:100798340 799.66