Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4649g00032 ATGGGAAGAGCACCTTGCTGTGACAAAAACGGACTCAAGAAAGGGCCATGGACGCCCGAGGAAGATCTAAAGCTTATCAACTACATCCAGACTCATGGACCAGGCAATTGGCGAACCCTCCCCAAGAATGCTGGTCTGCAAAGATGTGGCAAAAGTTGCCGCCTTCGGTGGACAAATTACTTGAGACCCGATATCAAGAGAGGGAGATTCTCCTTTGAGGAAGAAGAGACCATCATTCAGTTGCACAGTATCATGGGTAACAAATGGTCGGCTATAGCAGCACGATTGCCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACCCACATTAGGAAGAGACTGCTTCGAATGGGAATTGATCCGGTTACTCATGCCCCACGCCTTGACCTTCTTGAGATATCCTCCATTCTAAGGTCGGCGCTGACCAACCAATCGCTTCTGAATCTGCAAAGTTTATTGGGCGCTCAAGCTTTGATGAACCCGGAACTGTTGAAGCTGGCCACCACTCTGTTAGCGCTCAAGAATGAGAACCCAGATTTGGTTTCACAGAATCAACATCAAATCCTGCAGGCCGGGAATCATCAAGTAGACAGCCAAGCCTCCCCATTTAGGCAGATGCCAACGCAAATTACCAGTATGCATGAAAGCCTCACAGGCAATAGCACAAACATGAGCTGTCCAAGTTCGCTAGAGAATTCACCATTTCCTTCATATATGTGTGAGAACCTGATTAATCCGCAGCAAAACCAAGTTGATTTGCAAGGAAACCCAACATTTGGGCAGCGTCTAATAAACAATGAAAGTGTCCAGAACGTGGGCTATGAGTCAGTTCTGTCAACGCCTTTGTCGAGCCCAACCCCATTGAATTCATCGTCGCCGTATGTGAATAGCAGCGCGGAGGAGCAAACGGATACCCATTGCAGTGACTTATTCAAGTTCGAAATTCCTGAGAGTCTGGACATCAATGATTTCTTGTAA 984 0.4695 MGRAPCCDKNGLKKGPWTPEEDLKLINYIQTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLEISSILRSALTNQSLLNLQSLLGAQALMNPELLKLATTLLALKNENPDLVSQNQHQILQAGNHQVDSQASPFRQMPTQITSMHESLTGNSTNMSCPSSLENSPFPSYMCENLINPQQNQVDLQGNPTFGQRLINNESVQNVGYESVLSTPLSSPTPLNSSSPYVNSSAEEQTDTHCSDLFKFEIPESLDINDFL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4649g00032 327 MobiDBLite consensus disorder prediction 279 303 - -
Pral4649g00032 327 CDD SANT 69 112 IPR001005 -
Pral4649g00032 327 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4649g00032 327 CDD SANT 16 61 IPR001005 -
Pral4649g00032 327 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral4649g00032 327 Gene3D - 13 66 - -
Pral4649g00032 327 SMART sant 66 114 IPR001005 -
Pral4649g00032 327 SMART sant 13 63 IPR001005 -
Pral4649g00032 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Pral4649g00032 327 Gene3D - 69 116 - -
Pral4649g00032 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pral4649g00032 327 FunFam Transcription factor MYB39 69 130 - -
Pral4649g00032 327 FunFam MYB-related transcription factor 13 66 - -
Pral4649g00032 327 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pral4649g00032 327 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4649g00032 327 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 263 - -
Pral4649g00032 327 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4649g00032 Pral-Chr4649 189037 190221 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4649g00032 1 327 MYB Transcription Factor Family AT4G21440 50.411 7.73e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4649g00032 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4649g00032 K09422 - qsa:O6P43_000650 421.009