Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4649g00026 ATGGTTAATTTCTTACCATTCACAGGAGATCGTAACATAAATACCAAACAGACAGGGTCCCTCGTTAATTCAGATCCTGTGCGTGAGAATAAGGGGATAGACAGGTTACAGAAACAGAGGAAGATGGCGAGAACTCCAAGCTGCGACAAAAGTGGTCTGAAGAAAGGAACGTGGACGCCAGAGGAAGACAGGAAGCTAATTGCGTATGTTACTAGGTACGGCTGCTGGAATTGGCGCCAACTTCCCAAGTATGCTGGCCTGGCAAGGTGTGGAAAAAGTTGCAGACTTCGATGGCTGAATTACCTGAGGCCCAACGTCAAAAGAGGCGATTACACTCCTGAAGAAGAGCAGCTTATCATCCAACTGCACCACCAGCTGGGAAACAGATGGTCCGCGATTGCTGCAAAGCTGCCAGGGAGAACAGACAACGACATAAAGAACTACTGGCACACGAATCTCAAGAAGCGGGTTCAAGACAAGTCGGGAAAACCGGCCCGAGTTGAAGAGAAGGAGCCATCATCAGGTGAAAGAATGCAAGTTAACGATGCTGCTGGGGCTTGTGATGATAATAATCAGATCGGGGGGGAAACAAGCCGTCGGCCGTCGCCTGATCAGTCGTCGTCGAGTGTAACGACGGAGACCACAACAGGAGGCAGCAGCGAATCCCGTTTGATAGTGGAAGATGATGATGAGTTTGCTTTTCTGAATGATGCATTGGCAGACGTGAATTTCTGGACAGATCCCTATGTGGCTGACATTTTCTGTGACCCTACGCAAACAGCGTCTCTGGCCCCTTCGTTAACCGATCAATTCGATTACTTTACTCCTGATCCGTTGTGTGATGCAATGCTCTGGACTCAAAATTATGTTTACGATCAGTGTCCCGGCTTATTCTCATGA 900 0.4856 MVNFLPFTGDRNINTKQTGSLVNSDPVRENKGIDRLQKQRKMARTPSCDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWLNYLRPNVKRGDYTPEEEQLIIQLHHQLGNRWSAIAAKLPGRTDNDIKNYWHTNLKKRVQDKSGKPARVEEKEPSSGERMQVNDAAGACDDNNQIGGETSRRPSPDQSSSSVTTETTTGGSSESRLIVEDDDEFAFLNDALADVNFWTDPYVADIFCDPTQTASLAPSLTDQFDYFTPDPLCDAMLWTQNYVYDQCPGLFS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4649g00026 299 MobiDBLite consensus disorder prediction 157 176 - -
Pral4649g00026 299 ProSiteProfiles Myb-like domain profile. 50 102 IPR001005 -
Pral4649g00026 299 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 42 219 - -
Pral4649g00026 299 MobiDBLite consensus disorder prediction 157 223 - -
Pral4649g00026 299 FunFam MYB-related transcription factor 54 107 - -
Pral4649g00026 299 Gene3D - 110 181 - -
Pral4649g00026 299 Gene3D - 47 108 - -
Pral4649g00026 299 Pfam Myb-like DNA-binding domain 55 102 IPR001005 -
Pral4649g00026 299 Pfam Myb-like DNA-binding domain 108 153 IPR001005 -
Pral4649g00026 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 102 IPR017930 -
Pral4649g00026 299 CDD SANT 111 153 IPR001005 -
Pral4649g00026 299 SUPERFAMILY Homeodomain-like 52 149 IPR009057 -
Pral4649g00026 299 ProSiteProfiles Myb-like domain profile. 103 153 IPR001005 -
Pral4649g00026 299 SMART sant 107 155 IPR001005 -
Pral4649g00026 299 SMART sant 54 104 IPR001005 -
Pral4649g00026 299 CDD SANT 57 102 IPR001005 -
Pral4649g00026 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 157 IPR017930 -
Pral4649g00026 299 MobiDBLite consensus disorder prediction 191 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4649g00026 Pral-Chr4649 143215 144388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4649g00026 42 252 MYB Transcription Factor Family AT2G31180 48.341 1.32e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4649g00026 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4649g00026 K09422 - rcu:8287581 252.677