Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4649g00005 ATGGGCGATGGAGGCGTCGCATGCATGCCTTTGCAGCAGCAGCATATTATGGAGAGATTGCCGAATGGAGAAAAAACGCTTTGCGGAGGCACGAATGGGAATGGGTTCAATTCTAAGTTGCTCCAGTTTGCTGACAGTGATCGGAAGAAGAAGATGAAGGCGAAGAAAGAAGAGCCAGCAAAGAAATTTCAGGTGGAAAGAAGTGAATTGGCATCGGACGGGGTAGGCAAGAGCAACGATGAACTTGAGAATGATGAAACGTGCGCGGAAAAGGTACAAAAAGAAGAAATGGAAGAGGGAGAATTGGGCACTATGAAGTGGTCAAGAAATGATCTGGAAAATGGAGAGTTTGTTCCGGAGAAGCCGCGGAGGGGTGAACTTGAGAATGGAGTGATTGTTATTGAGAAATGTAAAAAGGGGGAGCTGGAAAAGGGAGAGATTGTTTATGGAAAATGGAGAAGAGAGGATGTGGAAAAGGGGGAGATAGTTTCGGAGAGGAGCAGGAAAGGAGAGGCTGATAAAGGGGAATGTGGCTTGGGTAAAAGTATTATAGATGACATTGAGAAGGGAGAATTCATTCCTGATAGATGGCACCGAGGGGAAATAGGAAAGGATGATTATGCTTACAGTAGAATGCGCAGGTACCAATCAGGCAGGGACAAAGGGTGGAAAAGTGAACGTGAACGCACACCACCTTCTGGGAGATATACAGGTGGTGATTATATTAGAAAGAAGGAATTTAATAGAAATGGGGGTCAGCATGCCAAGAGTGCTCCTAGGTGGGAGAGTGGGCCAGAGAGGAATATAAGGATTAGTTCGATGATAGTGGATGAGGAAAAAAATGAGCATAGCAATGGGAGGAACCATGCTCGAGAATACTCTGTGGGCAGTCGGTTGAAGCGGCATGGTAATGATTCAGATAGCAGTGAGCGCAAGCACTATGGAGATTATGCTGGTTTAAAAAGTCGTAGGCTTTCTGATGACAGCTGCCGGCCTCTTTATCCAGAACACTATTCTCATCGTTCTACAGAGAGGTCTTATAGAAATTCATCAAAAATATCAGCAGACAAGTATTCTCGGAATCATGAATCTTCTTTACCTGGTAGACCAGCTTATGACAGGCATGGATGTAGCCCTGTTCATTCTGACCGATCACCACGCGATCGTTCCAGGTATTATGATCATAGGGATCGTACTCCAGTTCGCCGTGAGAGGTCCCCACTTGGCCGCGATAAATCTCCATATGTTCGGGAGAAATCGCCCCATGGCCGTGACAGATCTCCATATGTTCGGGAGAAATCCCCCCATGGCCGTGACAGGTCTCCATATGTCCGGGAGAAATCCCCCCATGGCCGTGACAGGTCTCCATATATTCAAGAGAAATCACCCCATGGTCGTGAGAAGTCTCCATATGAAAAGATTTGGGATAGAAGCCGTTACAATGATCATAAAATAAGAAGTCCTACTCATGGTGAGCGGTCTCCACAAGACAGACGTCGACATCATGATCGTAGGGATCGGACGCCAAATTTGGTTGAACAACCTCCCTTGGATCGGCCTAGGCTAAATGGTATACGAGAAAACAATTCTAAAATGATATCAAGTGAAATGCATGACTCACCACATAGTTGTAAGGATCATGAAGATAAGCACATCAGTAGGGAGTCAAATTGTTCAGCTACAGATTCTCACAGTGAAAGAAATTTGCACGATGTAAATGGGTCAATTGAGAGAGACAACAGTGAGAAGCCTGAAAAGGAAGAGCAGTCCTGCAGCCCTACTGTAGGCCGCAAAGAATCTCCCCGCATTGAACCACTTCCTGAAGAGCTGCCTTCTATGGAAGAAGATATGGACATTTGTGATACTCCTCCTCATGTTCCTGTGGTGGCAGATTTGTCATCAGGGAAGTGGTTCTACCTTGATTATAGTGGTGTAGAACACGGGCCTTCTAAATTATCTGACATCAAGTTTCTTGTTAACGAGGGAATACTGATGTCAGATCACTTTGTCAAGCACCAAGATAGTGACAGGTGGTTAACAGCTGAGAATGCAGCATCACCGTTGGCAACACATAGTTTTCCATCCATTGTGTCAGACTCCATAACGCAGCTGGTAAACCCTCCAGAAGCTCCTGGTAATCTTTTGGTTGATACCGGAGATATCCTTCAATCCGGAGCTGAGACTTTTCAGAAGATGCCAGCTCCTTTGTCGCAGCCAATAGTATGCCCTAATGACAGCGTGGTTGCCTCTGAACCTCTAGAGGAATTCCACATTGATGAAAGGGTTGGAGTTTTGTTAGAGGGTCATGATGTAATTCCTGGGAGGGAGGTTGAAGCAATAAAAGAAGCCTTGCAAATGAATTTTGAATATGCAGATTGGGAAGGGTTGGGAGGCCTTGAAGGTTTTCCTTGGCATGATAATTTTCCGAGAGAAGATTGTGATTCAAGAACTGATTTTGCATCAAGGGATCCTGCGACTCAGTCAAGCATGCTCCTTGACAAGGATAATGGATTTGCCTTTGGTGATCCTGGCGACTGGTTTTCTGCCCGATGGTCATGCAAAGGTGGTGACTGGAAAAGAAATGATGATGTCCAAGATAGATCTTCTAGGAAGAGACTTGTCCTAAATGATGGGTTTTCATTATGTGAAATGCCTAAATCTGGATGTGAAGATCCTCGGTGGACTGAAAAGGATGACTTGTATTATCCTTCTCAAGGCAGGAGGCTTGATCTCCCTCTTTGGGCTTTTTGTGCTGATGAGAGGGCTGACTGTGGTACTGTAAGCAGAACGGCTCAAACTAAATCCTTTTTGGCCAGAGGAGTGAAAGGAAATGTTCTTCCGGTGGTAAGGATAAATGCTTGTGTGGTCAATGACCAGGGGTCATTGGTTTCTGAGCCACGACACAAAATCCGAGTCAAGGACAGACATCACTCAAGGCCTACTCGCCCATTCTCTTCAAGCATTGATAGCAAGAGATCATCGACTGAAGAAGATTCTCAGTCAAAAGCCATTAGTGATCAAAGTTCTTGCCTGAGCACGGAATTTGTCAATACTCCCAAAGACCGACTCTGTACGGTCAATGATTTACAATTACATTGGGGTGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGGCCTTTGTCGTTTTCAGAGCTGCAGGTTTTAGTAGATCAAGGAATTATAAAAAAGCATAGCAGTGTTTTCAGGAAATGGGATAAACTTTGGGTTCCTGTTACCTCTGCTGCGGAAACTTCTGATATTAGTCTTGGGTACCTCCAAGAAAGCAGCACAACAGCTGGCAAATGTTCGGGACTTCCATTGTTGCAAACTCAGGGTGTGTCATTCAGTGAATCTTGTACAAGCAGCAGTTTGTTTGACCGTGTACATCCTCAGTTTATAGGCTATACTCGTGGGAAGCTACACGAATTGGTAATGAAATCATACAAGAGCCGGGAGTTTGCTGCAGCTATAAATGAGGCTTTGGATCCCTGGATCAGTGCAAGACAACCAAAAAAAGAAAATGAAAAGCAACTGTATTGGAAATCAGAAGGTGATGCACGGGCTGCCAAAAGAGCTCGTATTCTGGTTGATGACAGTGAGGAAGACAGTGATGTGGAAGATGGTACCTTGACTCTCCTGAAGAATGAATCCGCTTTTGATGATCTATGTGGTGATGCTACTTTCCACAAACAAGAAAGTGGTTTCACTGATTCTGAAGCGGGAAGCTGGAGCTTGTTGGATGTTCATGTGTTGGCTCGAGTCTTCCACCATTTAAGATCTGATTTGAAGTCCCTTGTCTTTGCTTCATTGACGTGCAAGCATTGGAGAGCTGCTGCCACATTTTACAAGGGCGTTTCAAGACAGGTCAATTTGTCATCCTTGAGTAATTCTTGCACTGATTCCATTCTGGGGAGCATTATGAATGGATATAAGAAAGACAAAATCGGATCTATGATTCTAACTGGTTGCACCAATATTAGTGCGGACATGCTTGAGAAGATTCTTCTTTGGTTTCCCTCTTTATCTGCAATAGACATCAGAGGATGCAGCCAGTTTAATGACTTGACTTCTAAATTTCTCAATGTGAAATGGATCAAGAGCCGAAGTTCATGCATAAGCAAAACTGCAGAAGAGCCACATAAAATTAAAAGCCTTAAACAGATCACTGAGAAAACTTCATATGTTTCCAAGACCAGCAATCTAGGTGCCATGGATGATTTTGGTGAGCTGAAGGACTACTTTGATAGTGTGGATAAGAGAGACACAGCAAAGCAATTATTCCGTCGAAACTTATACAAGAGGTCCAAACTGTATGATGCCAGAAGGTCCTCTTCCATTCTATCTAGGGATGCTCGTACTAGACGATGGGCAATTAAGAAATCTGAAAATGGTTATAAAAGGATGGAGGAATTTATTGTTTCTGGTTTGAGGGAAATTATGAAGGAAAATCCCTGTGATTTTTTTGTGACCAAGGTTGCAGATATTGAAGCTAAAGTGAAAACTGGTTATTACAGTGGCCGGGGGTTGAGCTCTGTCAAGGAGGATATCAGCAGGATGTGTCGTGATGCAATAAAAGCAAGGAATCATGGTGATGCTGCTATGAATCATATTATTACATTATTCATTCAGCTTGTGACACGGCTGGAAGAAAGTTCCAAGTCTCTGAATGACAGAGATGCATCGTTGAAGTTAGGGGAAAGTGACTCATCATCCTTTTTTGGTTCCACCTCCTCAAAGTATAGGAAGAATAAATTGGTCACTGAGAGGAAGTACAAGAGTAATGGAGCACGTGGTAGTTTAGATAATGGAGACTATGTCTCTGATCGAGAAATTAGGAAACGTTTATTAAAGTTGAATAAGAAATCTTTTGATTCAGATGGTGAAACATCTGATGACACTGATATTTCTTCCGAAGACGGCAAGAGTGACAATGAAACCACAACATCTAACAGTGAAAGTGACCAAGAAATCCATTCAGAATGTCAAATTGTGGGGTCAAGAGGGGATGGACTCTTCACACCTGATGAGGGTTTGGATTTCATAGCTGATGATCGTGAATGGGGTGCCCGTATGACGAAAGCAAGTCTAGTTCCTCCAGTTACCCGGAAATATGAAGTCATTGACCATTATGTCATCGTAGCTGATGAGGAGGATGTGCAGAGGAAGATGAGAGTTTCATTACCAGATGACTATGCTGAAAAACTGAATGCACAAAAAAATGGCACTGAGGAGTCAGATATGGAACTGCCTGAAGTCAAGGACTACAAACCGAGAAAACAGCTTGGAGATGAGGTTATTGAGCAAGAAGTTTATGGAGTTGATCCTTATACGCACAATCTTTTGCTCGATTCTATGCCAGAGGAGTTAGATTGGTCTCTACAAGAGAAGCATTTGTTTATAGAGGACATGCTCCTTCGAACTTTGAATAAGCAAGTGAGGCATTTTACTGGAACAGGAAGCACTCCGATGAGCTACCCTTTGCAGCCTGTTATTGATGAAATTAAGAGGAGTGCTGAGGAGGACTGTGATGTAAGGATGATTAGAATGTGTCAGGGTATCCTAAAGGCCATAGATAGTCGCCCGGATGACAAATATGTTGCTTATAGAAAGGGCCTTGGTGTTGTTTGCGACAAAGAAGAAGGATTTGGTGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGAATACGTTCTCTGCAGAAAAATAGCAAAGATCCAGCTCCTGAATTCTATAATATATACCTTGAGCGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGGCCTAATTGTGAAGCAAAAGTTACAGCTGTTGACGGTCATTATCAAATTGGAATTTATGCTGTTCGTAAAATACAAAATGGTGAAGAAATCACTTTTGATTATAATTCTGTCACAGAGAGCAAGGAGGAATATGAGGCTTCGGTGTGTTTGTGTGGAAGCCAAGTTTGTCGTGGGAGTTATTTGAATCTGACTGGTGAAGGTGCATTCCAGAAGGTGCTGAAAGAGTGGCATGGAATTCTTGATCGACATTATTTGATGCTTGAAGCTTGTGAATTGAATTCTGTCTCTGAAGAGGACTATAATGATCTGGGAAGAGCTGGTTTGGGCAGTTGTTTGCTTGGCGGCCTGCCAGATTGGCTGGTTGCATATGCAGCTCGCCTTGTGAGATTCATCAATTTTGAAAGAACTAAACTTCCTGAGGAAATTTTGAGGCATAATCTGGAAGAAAAAAGGAAATATTTTTCAGATATATGTCTTGAAGTTGAGAGGAGCGATGCAGAGGTTCAGGCTGAGGGTGTGTACAACCAAAGGCTACAGAATCTTGCTGTCACCCTTGATAAGGTAAGATACGTTATGAGATGTATTTTTGGTGATCCACGGAAAGCACCACCTCCACTTGAAAAGCTCAGCCCTGAAGCAGCTGTTACCTTCCTCTGGAAAGGAGAGGATTCATTTGTTGAGGAGCTTCTTCAGTGCATGGCTCCTCATGTTGAAGAAGATGCCTTGAATGATCTGAGGGTCAAAATTCACTCTCATGATCCCTTGGCGTCTGGAGATATTCAAAAAGAGCTCCAGAAATCTCTGTTATGGTTGAGGGACGAGGTCAGAAATCTTTCTTGTACATACAAATGTCGGCATGATGCTACTGCTGACTTAATTCATATTTATGCTTATACCAATTGCTTCTTTAGAATACGGGATTATCAAGCTATTACTTCTCCACCTGTCTATATTAGTCCGCTTGACTTAGGTCCCAAGTACGCTGACAAGTTGGGAACAGGATTTCAGGAGTATCGAAAGACGTATGGTGAAAATTATTGTTTAGGGCAGCTAATTTTTTGGCATAACCAGAGTAATGCAAATCCAGATAATAGCCTGGCCAGAGCTCGCAGGGGTTGCTTATCTTTGCCAGATGTAGGATCCTTTTATGCAAAGGCTCAGAAGCCATCACAGCATCGTGTATATGGTCCTAGGACTGTTAGATCAATGCTGGCAAGAATGGAGAAGCAGCCGCAGAGACCTTGGCCCAAAGACAGGATATGGTCGTTCAAAACTTCTCCGAAATTTTTTGGCAGCCCAATGTTAGATTCTGTTATAAATAACACTCCACTGGACAGGGAAATGGTTCATTGGCTGAAGCACAGAAGAGCCGTATTCCATGCCATGTGGGACAGATGA 7281 0.4337 MGDGGVACMPLQQQHIMERLPNGEKTLCGGTNGNGFNSKLLQFADSDRKKKMKAKKEEPAKKFQVERSELASDGVGKSNDELENDETCAEKVQKEEMEEGELGTMKWSRNDLENGEFVPEKPRRGELENGVIVIEKCKKGELEKGEIVYGKWRREDVEKGEIVSERSRKGEADKGECGLGKSIIDDIEKGEFIPDRWHRGEIGKDDYAYSRMRRYQSGRDKGWKSERERTPPSGRYTGGDYIRKKEFNRNGGQHAKSAPRWESGPERNIRISSMIVDEEKNEHSNGRNHAREYSVGSRLKRHGNDSDSSERKHYGDYAGLKSRRLSDDSCRPLYPEHYSHRSTERSYRNSSKISADKYSRNHESSLPGRPAYDRHGCSPVHSDRSPRDRSRYYDHRDRTPVRRERSPLGRDKSPYVREKSPHGRDRSPYVREKSPHGRDRSPYVREKSPHGRDRSPYIQEKSPHGREKSPYEKIWDRSRYNDHKIRSPTHGERSPQDRRRHHDRRDRTPNLVEQPPLDRPRLNGIRENNSKMISSEMHDSPHSCKDHEDKHISRESNCSATDSHSERNLHDVNGSIERDNSEKPEKEEQSCSPTVGRKESPRIEPLPEELPSMEEDMDICDTPPHVPVVADLSSGKWFYLDYSGVEHGPSKLSDIKFLVNEGILMSDHFVKHQDSDRWLTAENAASPLATHSFPSIVSDSITQLVNPPEAPGNLLVDTGDILQSGAETFQKMPAPLSQPIVCPNDSVVASEPLEEFHIDERVGVLLEGHDVIPGREVEAIKEALQMNFEYADWEGLGGLEGFPWHDNFPREDCDSRTDFASRDPATQSSMLLDKDNGFAFGDPGDWFSARWSCKGGDWKRNDDVQDRSSRKRLVLNDGFSLCEMPKSGCEDPRWTEKDDLYYPSQGRRLDLPLWAFCADERADCGTVSRTAQTKSFLARGVKGNVLPVVRINACVVNDQGSLVSEPRHKIRVKDRHHSRPTRPFSSSIDSKRSSTEEDSQSKAISDQSSCLSTEFVNTPKDRLCTVNDLQLHWGDWYYLDGSGRERGPLSFSELQVLVDQGIIKKHSSVFRKWDKLWVPVTSAAETSDISLGYLQESSTTAGKCSGLPLLQTQGVSFSESCTSSSLFDRVHPQFIGYTRGKLHELVMKSYKSREFAAAINEALDPWISARQPKKENEKQLYWKSEGDARAAKRARILVDDSEEDSDVEDGTLTLLKNESAFDDLCGDATFHKQESGFTDSEAGSWSLLDVHVLARVFHHLRSDLKSLVFASLTCKHWRAAATFYKGVSRQVNLSSLSNSCTDSILGSIMNGYKKDKIGSMILTGCTNISADMLEKILLWFPSLSAIDIRGCSQFNDLTSKFLNVKWIKSRSSCISKTAEEPHKIKSLKQITEKTSYVSKTSNLGAMDDFGELKDYFDSVDKRDTAKQLFRRNLYKRSKLYDARRSSSILSRDARTRRWAIKKSENGYKRMEEFIVSGLREIMKENPCDFFVTKVADIEAKVKTGYYSGRGLSSVKEDISRMCRDAIKARNHGDAAMNHIITLFIQLVTRLEESSKSLNDRDASLKLGESDSSSFFGSTSSKYRKNKLVTERKYKSNGARGSLDNGDYVSDREIRKRLLKLNKKSFDSDGETSDDTDISSEDGKSDNETTTSNSESDQEIHSECQIVGSRGDGLFTPDEGLDFIADDREWGARMTKASLVPPVTRKYEVIDHYVIVADEEDVQRKMRVSLPDDYAEKLNAQKNGTEESDMELPEVKDYKPRKQLGDEVIEQEVYGVDPYTHNLLLDSMPEELDWSLQEKHLFIEDMLLRTLNKQVRHFTGTGSTPMSYPLQPVIDEIKRSAEEDCDVRMIRMCQGILKAIDSRPDDKYVAYRKGLGVVCDKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYAVRKIQNGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILRHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEAAVTFLWKGEDSFVEELLQCMAPHVEEDALNDLRVKIHSHDPLASGDIQKELQKSLLWLRDEVRNLSCTYKCRHDATADLIHIYAYTNCFFRIRDYQAITSPPVYISPLDLGPKYADKLGTGFQEYRKTYGENYCLGQLIFWHNQSNANPDNSLARARRGCLSLPDVGSFYAKAQKPSQHRVYGPRTVRSMLARMEKQPQRPWPKDRIWSFKTSPKFFGSPMLDSVINNTPLDREMVHWLKHRRAVFHAMWDR 2426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 47 121 - -
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 1624 1659 - -
Pral4649g00005 2426 Gene3D Ribonuclease Inhibitor 1239 1375 IPR032675 -
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 1644 1659 - -
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 966 1005 - -
Pral4649g00005 2426 SUPERFAMILY SET domain 1871 2019 IPR046341 -
Pral4649g00005 2426 CDD SET_SETD2-like 1870 2018 - -
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 47 106 - -
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 272 369 - -
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 538 593 - -
Pral4649g00005 2426 CDD F-box_SF 1246 1282 - -
Pral4649g00005 2426 ProSiteProfiles SET domain profile. 1857 1996 IPR001214 GO:0005515
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 1624 1643 - -
Pral4649g00005 2426 SUPERFAMILY F-box domain 1241 1281 IPR036047 GO:0005515
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 376 512 - -
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 215 605 - -
Pral4649g00005 2426 Gene3D SET domain 1853 2027 IPR046341 -
Pral4649g00005 2426 Pfam SET domain 1941 1996 IPR001214 GO:0005515
Pral4649g00005 2426 SMART set_7 1862 2002 IPR001214 GO:0005515
Pral4649g00005 2426 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 453 2426 - -
Pral4649g00005 2426 MobiDBLite consensus disorder prediction 215 251 - -
Pral4649g00005 2426 Pfam Protein SET DOMAIN GROUP 2 C-terminal 2007 2426 IPR045606 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4649g00005 SET 5.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4649g00005 K22748 - gmx:100815409 3573.48