Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4649g00002 ATGGCTCCAAAGCGTCGCCTTCAAGACTCGCCTCCTGCTGCTGCTGCTGCTTCTTCTGCAGAAGATGAAGTGGAAGAATCAGAGAGCGATGCTGTTGAAGAGGAAGCCAACGGTGTTTCTGACGACATAGAGCGCGAAGATGGAAAGTCTGAGGGCGATGCTGAGGATGAATCGGCTGAGGAATCCGAAACCGAGTCCGACAACACTCAGCCCTCGCCGTCCGTGTCGGACTTCACTATCAAGCCCATTGTTAGCAAGCCAATCAATGACTCCACGAAATCTATGAAGCATGCTACCAACAACAATTCGGCTCCTGTGCCAGCGACGATCGTCGCTGCCGGAGGCTCAAAGCGCTCTAATGAGAGCAACGCGGAGAAGAAAGAGTCCAAGAAGAAGAAGGTATCGGAAAGTCAAGATGACGATGTAAAAAAGGAATCTGGTGTCCAACGTATTTGGAATGAGGATGATGAGATCGCGATCTTAAAGGGCATGATCGATTACCATTCAAAGAGAGGTGTTGACCCATGCTCTGAGATGTCGTTGTTTCATGAATACATGAAGAATAAGATCCATGCTGATGTATCCAAGATACAATTAGTGAACAAAATCAGGAGTCTGAAGAGGAAATTCCAAACGAATGCAAGAAAGGGTGAAAATGGTGAGGACCCTGTTTTCTCTAAGCCGCGTGATCGCGAAATTTTTGAGCTTTCCAAAAAAGTTTGGGAATCTGCAGCTGCTAATGGAGTGGATCAGAGAAAGCCAACCCAGAGCAAAGGCAAGAATTCTTCTACTGTAGTATCGCCAAAGCGGGAAATAGCTGAGAATAAAGATGAGCCACATGGTGACGTGAATGCTATACCAGCAAAATCATGCTCTAAATCGTCCGTCTTGGATGGGTTTCTGGTCTCCGGGAAGCTTTCGTTACCTGAATCTGCCATGGACATTGTGAAGGAAGCAATACCTTTGATCGGGAGTTCGAAGGCCAAGGAGTTGGAACGAAGAGGGAAGGAATTGCAGAAGGATGAATTTCTGTTGTACTTAAAGAGGGTGGAATTGATTCATGATAGCGCAAAACTAGCACTGGCTGTAATAAAATCATCGATGTAG 1107 0.4643 MAPKRRLQDSPPAAAAASSAEDEVEESESDAVEEEANGVSDDIEREDGKSEGDAEDESAEESETESDNTQPSPSVSDFTIKPIVSKPINDSTKSMKHATNNNSAPVPATIVAAGGSKRSNESNAEKKESKKKKVSESQDDDVKKESGVQRIWNEDDEIAILKGMIDYHSKRGVDPCSEMSLFHEYMKNKIHADVSKIQLVNKIRSLKRKFQTNARKGENGEDPVFSKPRDREIFELSKKVWESAAANGVDQRKPTQSKGKNSSTVVSPKREIAENKDEPHGDVNAIPAKSCSKSSVLDGFLVSGKLSLPESAMDIVKEAIPLIGSSKAKELERRGKELQKDEFLLYLKRVELIHDSAKLALAVIKSSM 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4649g00002 368 MobiDBLite consensus disorder prediction 65 107 - -
Pral4649g00002 368 MobiDBLite consensus disorder prediction 1 149 - -
Pral4649g00002 368 Pfam Protein of unknown function, DUF573 149 242 IPR007592 GO:0006355
Pral4649g00002 368 MobiDBLite consensus disorder prediction 245 283 - -
Pral4649g00002 368 Coils Coil 17 37 - -
Pral4649g00002 368 MobiDBLite consensus disorder prediction 21 41 - -
Pral4649g00002 368 PANTHER BNAANNG10740D PROTEIN-RELATED 9 360 IPR007592 GO:0006355
Pral4649g00002 368 MobiDBLite consensus disorder prediction 48 64 - -
Pral4649g00002 368 MobiDBLite consensus disorder prediction 120 149 - -
Pral4649g00002 368 MobiDBLite consensus disorder prediction 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4649g00002 Pral-Chr4649 13430 14979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4649g00002 54 260 GeBP Transcription Factor Family AT4G00390 35.349 1.79e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pral4649g00002 DUF573 2.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4649g00002 - - pcin:129315915 507.679