Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4649g00001 ATGGAGATGTCAAGATCCAGTTATGCTGTTATTTACGTGATTCTTCTTTGCGCGTTGGCTAAAGGAGGCTGCGAAGGTAAGAGGTGGAATCTGCGGGAGTTTCTCAATGAAGAATGTCATTTGTCGTCGTCACTTCTTGAAGATGGGAAAAAGTTAGAGCAAGCTTGGAAACACTGTAGGAAAGAGTTGGCAGCGAGGAGCCATGGGAACCAAGATTCTGAGTTGCATCCAACAGAAGCAGGGGGCAGTGACCTGGGGCCTTCACTTGGAGTTGAGGACATCCTACGCCAAGCGACTGAGTTTCTGGGACTCCAGTCCGAACAAAACTTCCTGGATTGCATCAAAACCAAAACTTCCCATGCTCCTGTTTCTCTAGACAATAATGCTGCCTCTCCACCTGTGGTTACCACGTACTTGACCAGTGGCTGTGAAAGGCACCTGCTTGCTGATTCACCGGCTGACAAAGTTCCCCCAAGCACTACTCCTTCTCATTCTCCTTCTCCTTCTTCATCTCCGTCATCTTCGTCTCCATCTCCGTCATCTCCGTCTCCTGGTCTTGCAAGTGAATCACCAAGCCATGACACAAAGTCTTCTGATTCTCCATCTGACGATTCCCCTTCTGGTTCTCTTTCACCAGATGAGTTTATGCCACATCAATCGCCACTACCACCTAGGTCTCCTAAACGTACTCCCCCATCTGTGCCTTTAGACTCCTCTCCTCCTCCTCCTCCTGAAGGTGATAACGGCAATCATATGCTAAAATTAATTTTTATTGCTGCTGTAACGGTATGTGCAATCGCAGCATTATTATTAATCTGCCTCTGCTGGGGTGCCGGAACCAACAAAGTCGACGACCCAACAGAGGCACACAAAGGCGACCGGGCTACAGTCACACTAGCCTCCGCAGATGTTTTTTCTGGTTCGCAGAAGGCTGTTGTTTTGGAAAAGCATGACAAGAAAGTATATACTACGACCGGCGGTCTGATGGCAAACTCTGAAGGTGGCGGCGGCTCACTAACTGAGACAACAACATCGTCTACTGAACAAATGGCTAACCCTCCTCTGAAACCACCTCCGGGAAAATCAGCTCCTCCGCCTCCTCAGCCGCCGCCCCCACCGCCGCCAGCTGCTCCTCGTGCCCCACCACCTCCACCTCCAAAAGCTAAGGTTCCGCCAATTCCCCGGAAATCAATTCAAGGTAAAAATAAAGCACAGGGCAACTCTAGAGAGGGCGGTGAATGTGATGCTCCAAAACCCAAATTGAAGCCATTTTTCTGGGATAAAGTTAACAAAGCTGATCAAGGCATGGTTTGGCAACAAATCAATCAGGGATCATTCCAGTTCAATGAGGAAATGATCGAGTCTTTATTTGGTTGTGGCAACCAGAACAAAAATCAACGCAAGAAAGAAGCATCACTTGAACCTGCAATTCAATACATTCAGATTATTGACCCTAGAAAAGCACAGAATCTATCAATTCTCTTGCGAGCGCTGAATGTGACAACGGAAGAAGTTGTTGATGCCCTTGAAGAAGGAAGTGAGATTCCGGCTGAGATCATCCACGCGTTGCTGAGGATGACGCTAACAGCAGACGAGGAATTAAAACTTAGACTATTCACTGGCGACCTAAATCAACTTGGCCCTGCTGAGAGATTTCTCAAGGTGTTGGTTGACATTCCCTTCGCTTTCAAACGCCTAGAATCTTTGATGTTCATGACTACCTTTACAGAAGAGGTCACGAGTCTCAAGGAGTCCTTTACAACACTAGAGGTTGCCTGCAACAACCTCAGAAAAAGCAGGTTATTCCTGAAACTATTAGAAGCAGTTCTGAAAACTGGCAACCGAATGAATGATGGCACCTATCGTGGCGGTGCTCAGGCATTTAAGCTTGACACACTACTGAAACTATCTGATGTAAAAGGAATTGATGGCAAAACAACCCTATTACACTTCGTCGTCCAAGAGATTATACGATCTGAGGGCATAAGAGCTGTACGGACACAGAAAGCTAACCAAACCAGCGGGTCTAGTGTGAAAACCGAAGATTTCCTTGATGACACCAATGAAGAATCAACAGCAGAGCATTATCGCAGGCTGGGTCTTCAGGTGGTTTCAGGTTTAGGCGAGGAGCTGGAAGACGTCAAAAAGGCGGCAGTTGTAGACGGTGAAGGCATAACAGCCACAGTCTCAAAGCTTGGCCAGTCATTAGTGAAGGCCAAAGAGTTCCTCAACAAGGAGATGAGGAGTCTTGATGAAGACTCAGAATTCCATCGTTGCTTGGAATGTTTTGTGGAGAAAGCAGAGTCAGAGATCACATGGCTGCTGGAGGAAGAGAAGAGGATAATGGCTCTGGTAAAGAGCACGGGCGATTATTTCCATGGGACTGCAGGAAGAGACGAAGGATTGCGTTTGTTCGTGGTGGTGCGCGATTTCTTGATAATGCTGGATAAGGCATGTAAAGAGGTTCAAGACACAAACATGAAATCAGCAAAGGCTTCCAAGAAAGAGAGTCCAACCGTATCATCTGTTCCAGAGACTCGGCAGCCACATGATATTCATCGGCGACTATTCCCCGCAATTGCAGAGCGGCGAATGGGTTTCTCCGATTCCGACGATGAAAGCTCATCATCATCACCATAG 2640 0.4739 MEMSRSSYAVIYVILLCALAKGGCEGKRWNLREFLNEECHLSSSLLEDGKKLEQAWKHCRKELAARSHGNQDSELHPTEAGGSDLGPSLGVEDILRQATEFLGLQSEQNFLDCIKTKTSHAPVSLDNNAASPPVVTTYLTSGCERHLLADSPADKVPPSTTPSHSPSPSSSPSSSSPSPSSPSPGLASESPSHDTKSSDSPSDDSPSGSLSPDEFMPHQSPLPPRSPKRTPPSVPLDSSPPPPPEGDNGNHMLKLIFIAAVTVCAIAALLLICLCWGAGTNKVDDPTEAHKGDRATVTLASADVFSGSQKAVVLEKHDKKVYTTTGGLMANSEGGGGSLTETTTSSTEQMANPPLKPPPGKSAPPPPQPPPPPPPAAPRAPPPPPPKAKVPPIPRKSIQGKNKAQGNSREGGECDAPKPKLKPFFWDKVNKADQGMVWQQINQGSFQFNEEMIESLFGCGNQNKNQRKKEASLEPAIQYIQIIDPRKAQNLSILLRALNVTTEEVVDALEEGSEIPAEIIHALLRMTLTADEELKLRLFTGDLNQLGPAERFLKVLVDIPFAFKRLESLMFMTTFTEEVTSLKESFTTLEVACNNLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGIDGKTTLLHFVVQEIIRSEGIRAVRTQKANQTSGSSVKTEDFLDDTNEESTAEHYRRLGLQVVSGLGEELEDVKKAAVVDGEGITATVSKLGQSLVKAKEFLNKEMRSLDEDSEFHRCLECFVEKAESEITWLLEEEKRIMALVKSTGDYFHGTAGRDEGLRLFVVVRDFLIMLDKACKEVQDTNMKSAKASKKESPTVSSVPETRQPHDIHRRLFPAIAERRMGFSDSDDESSSSSP 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4649g00001 879 MobiDBLite consensus disorder prediction 826 855 - -
Pral4649g00001 879 Pfam Formin Homology 2 Domain 415 815 IPR015425 -
Pral4649g00001 879 PANTHER FORMIN-RELATED 243 863 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral4649g00001 879 ProSiteProfiles Formin homology-2 (FH2) domain profile. 411 841 IPR015425 -
Pral4649g00001 879 MobiDBLite consensus disorder prediction 67 89 - -
Pral4649g00001 879 MobiDBLite consensus disorder prediction 149 247 - -
Pral4649g00001 879 MobiDBLite consensus disorder prediction 325 351 - -
Pral4649g00001 879 MobiDBLite consensus disorder prediction 352 392 - -
Pral4649g00001 879 MobiDBLite consensus disorder prediction 325 420 - -
Pral4649g00001 879 PRINTS Proline rich extensin signature 349 374 - -
Pral4649g00001 879 PRINTS Proline rich extensin signature 201 222 - -
Pral4649g00001 879 PRINTS Proline rich extensin signature 156 168 - -
Pral4649g00001 879 PRINTS Proline rich extensin signature 225 241 - -
Pral4649g00001 879 PRINTS Proline rich extensin signature 172 188 - -
Pral4649g00001 879 SUPERFAMILY Formin homology 2 domain (FH2 domain) 370 832 - -
Pral4649g00001 879 SMART it6_source 411 830 IPR015425 -
Pral4649g00001 879 MobiDBLite consensus disorder prediction 217 247 - -
Pral4649g00001 879 MobiDBLite consensus disorder prediction 832 846 - -
Pral4649g00001 879 Gene3D Formin, FH2 domain 428 843 IPR042201 -
Pral4649g00001 879 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4649g00001 Pral-Chr4649 6590 11390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4649g00001 389 844 FH2 protein (formin) Gene Family AT5G67470 45.011 5.65e-117 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4649g00001 - - pcin:129298235 1095.49