Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4648g00015 ATGGGTAATTGTTGCATTACTCCATTTCGCACTCAGGAGAAGAAAAAGAAGGGGAATAAAAACAAACAGAACCCGTTTGCGATTGATTTCGGTAAAAATTATGGAAATGGTGGAAGCAAAATTAACGTTTTGAAGGACCCAACAGGCCGCGAAATTGAACTCAAATACGAGCTTGGTCGCGAGCTTGGAAGAGGGGAATTCGGAGTCACCTACCTATGCACCGATAAAGAGAGCGGTGAGAATTTCGCTTGTAAATCGATATCGAAGAAAAAGCTGAGAACAGCCATTGATATCGAGGATGTTAGGAGAGAGGTTGAGATCATGAAGCATTTGCCACCGCACCCAAATATTGTGAGCTTAAAGGACACTTACGAGGACGACAATGCTGTCCATCTTGTGATGGAACTGTGCGAGGGAGGAGAATTGTTCGACCGGATAGTTGCGCGTGGACACTACACAGAAAGGGCTGCCGCAGTTGTCATACGGACAATCGTTGAAGTCGTTCAGGTGTGTCACAAACATGGCGTGATGCACAGGGATCTCAAGCCTGAGAACTTTTTGTTTGCAAACAAGAAGGAAACATCGCCTCTGAAGGTTATTGATTTTGGATTGTCAGTGTTCTTCAAACCTGGTGAAAGATTTAACGAGATAGTTGGAAGCCCCTATTACATGGCACCCGAGGTATTAAAACGAAATTATGGTCCAGAAGTAGATATCTGGAGTGCTGGAGTAATTCTGTACATCCTACTTTGTGGTGTCCCACCATTTTGGGCAGAAACTGAACAGGGAGTTGCACAGGCAATCATACGATCTGTCATTGATTTTAAAAGGGACCCCTGGCCTAAGGTTTCTGATAATGCAAAAGATCTCGTGAAGAGGATGCTTAATCCCAACCCACAGCAGCGTCTTACTGCTCAGGAAGTGTTAGATCATCCATGGTTACAGAATGCCCAAAAAGCTCCTAATGTTTCACTGGGAGAAACTGTAAGGGCAAGGCTCAAGCAATTCTCTGCCATGAACAAGCTTAAGAAAAGAGCTCTAAGGGTGATAGCAGAGTACTTGTCAGTAGAAGAAGTTTCCGGATTAAAAGAGAGATTCCAGCTGATGGATACGAGTAACAGAGGAAAGATTAACAGTGATGAGTTACGAGCAGGGTTGCATAAATTAGGGCATCCTATTCCTGATGAAGACCTCCGCATTCTGATGGAAGCTGGTGACGTAGATAAGGATGGGCACTTGGATTATGGAGAATTTGTTGCCATCTCAGTTCATCTGAAGAGGATGGGCAATGATGAGCACCTTCACAAAGCTTTCCAATTTTTTGACAAGAACAACAGTGGGTATATAGAAATGGAGGAGCTACGTCAGGCCTTAGCCGATGAAGTTGATACAAACAATGAAGTCATCAATGCAATTATGCATGACGTGGACACAGATAAGGATGGAAAAATAAGCTATGAGGAATTCGATGCAATGATGAAGGCCGGCACAGATTGGAGAAAAGCATCAAGGCAGTATTCACGAGAGAGATTTAGTAGTCTGAGTCTGAAGTTGATGAGGGATGGGTCGTTGAGATGA 1578 0.4385 MGNCCITPFRTQEKKKKGNKNKQNPFAIDFGKNYGNGGSKINVLKDPTGREIELKYELGRELGRGEFGVTYLCTDKESGENFACKSISKKKLRTAIDIEDVRREVEIMKHLPPHPNIVSLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAVVIRTIVEVVQVCHKHGVMHRDLKPENFLFANKKETSPLKVIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKRMLNPNPQQRLTAQEVLDHPWLQNAQKAPNVSLGETVRARLKQFSAMNKLKKRALRVIAEYLSVEEVSGLKERFQLMDTSNRGKINSDELRAGLHKLGHPIPDEDLRILMEAGDVDKDGHLDYGEFVAISVHLKRMGNDEHLHKAFQFFDKNNSGYIEMEELRQALADEVDTNNEVINAIMHDVDTDKDGKISYEEFDAMMKAGTDWRKASRQYSRERFSSLSLKLMRDGSLR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4648g00015 525 CDD STKc_CAMK 55 313 - -
Pral4648g00015 525 Pfam EF-hand domain pair 362 421 IPR002048 GO:0005509
Pral4648g00015 525 Pfam EF-hand domain pair 432 494 IPR002048 GO:0005509
Pral4648g00015 525 SUPERFAMILY Protein kinase-like (PK-like) 55 318 IPR011009 -
Pral4648g00015 525 ProSiteProfiles EF-hand calcium-binding domain profile. 429 463 IPR002048 GO:0005509
Pral4648g00015 525 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Pral4648g00015 525 Gene3D Transferase(Phosphotransferase) domain 1 142 322 - -
Pral4648g00015 525 ProSiteProfiles EF-hand calcium-binding domain profile. 393 428 IPR002048 GO:0005509
Pral4648g00015 525 Gene3D - 323 496 - -
Pral4648g00015 525 Gene3D Phosphorylase Kinase; domain 1 58 141 - -
Pral4648g00015 525 FunFam calcium-dependent protein kinase 13 142 322 - -
Pral4648g00015 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Pral4648g00015 525 FunFam Calcium-dependent protein kinase 7 323 497 - -
Pral4648g00015 525 SMART serkin_6 56 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4648g00015 525 CDD EFh 433 494 IPR002048 GO:0005509
Pral4648g00015 525 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 489 - -
Pral4648g00015 525 ProSiteProfiles EF-hand calcium-binding domain profile. 464 499 IPR002048 GO:0005509
Pral4648g00015 525 ProSiteProfiles Protein kinase domain profile. 56 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4648g00015 525 ProSitePatterns EF-hand calcium-binding domain. 477 489 IPR018247 -
Pral4648g00015 525 ProSiteProfiles EF-hand calcium-binding domain profile. 357 392 IPR002048 GO:0005509
Pral4648g00015 525 SUPERFAMILY EF-hand 338 506 IPR011992 -
Pral4648g00015 525 Pfam Protein kinase domain 56 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4648g00015 525 ProSitePatterns EF-hand calcium-binding domain. 406 418 IPR018247 -
Pral4648g00015 525 SMART efh_1 361 389 IPR002048 GO:0005509
Pral4648g00015 525 SMART efh_1 468 496 IPR002048 GO:0005509
Pral4648g00015 525 SMART efh_1 397 425 IPR002048 GO:0005509
Pral4648g00015 525 SMART efh_1 433 461 IPR002048 GO:0005509
Pral4648g00015 525 FunFam Calcium-dependent protein kinase 1 58 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4648g00015 Pral-Chr4648 67295 72678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4648g00015 1 525 EF-hand Containing Proteins AT5G19450 78.220 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral4648g00015 Pkinase 1.8e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4648g00015 K13412 - pvy:116129347 922.154