Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4648g00009 ATGGAAATTCCGCACTTGTTGTGTCTTGTGGTCGCTTGGTATGTGTCAAAATCTGGTCTTGTAGTTGTGGGTGCTGAGCTACAGGATCAAACTATACTTCTTGCCCTTAACCAAGAGCTTAAAGTACCAAGATGGGACACCAACAACTCAAGTTACTGCTCTTGGCAAGGCGTTAGCTGCAATGACCGCTCAATGGTAGTGAAGATCGATCTGTCTCATGCAAACCTCCGAGGTAATGTCACTCTAGTGTCCCAGCTCAAAGCTCTTAGGCAGCTTGACCTTTCAAATAACAATTTTCATGGTTACATTCCTCCGGCTTTTGGAAATTTATCCGATCTTGAAGTTCTTGATTTGTCTTCAAATAAGTTCGAAGGTTCAATTCCACCAGAATTGGGCGGCCTAAGAAATCTTATGTCGTTAAACCTTTCCAACAACGTGCTTGTGGGAAAAATACCAAGTGAACTTCATGGACTAGAGAAATTGCAGGAGTTTCAAGTCTCTAGTAATCAACTGAATGGATCTCTACCTTCTTGGCTGGGAAACTTAACCAATCTGAGAGTTTTGGCTGCCTATGAGAATCTTCTAGGTGGCATGATTCCGGATAATCTTGGCTTGGCTTCTGAGCTTGAAATTCTTAACCTGCATTCAAACCAACTTGAAGGCCCTATACCGGCAAGCATTTTTACTTCAGGAAAGCTGGAAGTTCTGGTTCTGACCCAGAACAATTTGAGTGGTGATCTTCCTCAAGAACTCGGGAATTGCCAAGGCCTTTCCAATATCCGAATTGGGAACAACCATCTAGTAGGTGCTATTCCTAAGACCATAGGAAACATTAGTAGTCTCACCTACTTTGAAGCAGACAATAACAATCTTTCTGGTGAGGTAGTGTCTGAGTTTTCTCAGTGTTCTAATCTCACCCTTCTGAACTTAGCTTCGAACGGATTCAGTGGAACGATTCCACCAGAACTTGGACAGCTTATGAACTTGCAGGAATTAATTCTTTCTGGAAATAGCCTATTTGGAAATATTCCGGAGTCAATTTTGAGGTGTAGGAATCTTAACAAGCTTGATATAAGCAATAACAGGTTCAATGGAACACTACCAACTGACATCTGCAAGTTGTCCAGGCTGCAGTTCTTGCTATTGGGTCAGAATTCCATTGGAGGGGAGATCCCTCATGAAATTGGAAATTGTGCAAAACTTCTTGAGTTGCAAATGGGCGGTAACTATTTGACTGGAATTATCCCTTCCGAGATTGGTCACATTAGGAACTTGCAGATTGCTTTAAATTTGAGCTTTAATCATCTTCATGGATCACTGCCTCCTGAGTTAGGAAGACTGGACAAACTTGTCTCTCTTGATGTTTCGAACAACAGACTCTCAGGCAATATCCCAGCTGAGCTGAAGGGTATGTTGAGCTTGATAGAGGTTAACTTTTCAAATAATTTGCTCAGCGGCCCAGTACCAGCATTTGTGCCATTCCAAAAGAGTCCCAATTCAAGTTTTGTGGGTAATAAAGGGCTCTGTGGAGAGCCATTAAACTCTTCATGTGGAGATATTTATGATGACAGCAATAACTACCATCATAGGGTTTCTTACAGAATCGTACTTGCGGTAATTGGTTCTGGTTTGGCAGTTTTTATGTCAGTTACTGTGGTGGTCTTGCTGTTTATGATTAGAGAAAGGCAAGAAAAAGCCGCCAAAGATGCTGGGATGGTTGATGACGAAACTAATAACAAACCAACCATAGTAGCAGGGAGTGTCTTTGTTGAGAATCTAAGACAAGCTGTAGACCTTGATGCGGTTGTTAAGGCAACCCTCAAGGATTCTAATAAGCTCAGCAGTGGTACTTTCAGTACAGTTTACAAGGCAGTCATGCCTTCTGGGATGGTTTTATCTGTTAGGAGACTCAAGTCCATGGATAAGACAATAATCCACCACCAAAACAAGATGATTAGGGAACTTGAGAGGCTGAGCAAACTCTGTCATGACAATCTGGTTCGGCCCATCGGATATGTTATTTATGAAGATGTTGCTCTTCTCTTGCATCATTTTTTACCCAATGGAACATTGGCCCAGTTTCTTCATGAATCTAGCAAGCAACCTGAATATCAACCCGACTGGCCTACTAGATTATCCATTGCCATCGGCGTTGCAGAAGGTCTGGCTTTCCTGCATCATGTGGCAATTATCCACCTTGACATTTCTTCTGGTAATGTTCTTCTAGATGCAAATTTCAAGCCTTTGCTTGGGGAGATTGAGATATCAAAACTTCTCGACCCAACCAGAGGTACCGCAAGCATTAGTGCTGTTGCTGGTTCCTTTGGATACATACCACCAGAATATGCATATACAATGCAAGTCACAGCACCTGGCAATGTCTACAGTTATGGTGTAGTTCTACTTGAGATCCTGACGTCACGACCCCCAGTTGATGAGGATTTCGATGAGGGCATAGATTTGGTGAAGTGGGTTCATAGTGCTCCAGTCAGAGGGGAAACTCCAGAGCAGATACTCGATTCAAGGCTTAGCACAGTATCATTTAGTTGGAGGAAAGAAATGCTTGCTGCTTTGAAGGTTGCATTGCTCTGCACTGATACTACACCTGCTAAACGACCTAAGATGAAGAAGGTAGTGGAAATGCTTCAAGAATTGAGGCAAGATTGA 2667 0.4259 MEIPHLLCLVVAWYVSKSGLVVVGAELQDQTILLALNQELKVPRWDTNNSSYCSWQGVSCNDRSMVVKIDLSHANLRGNVTLVSQLKALRQLDLSNNNFHGYIPPAFGNLSDLEVLDLSSNKFEGSIPPELGGLRNLMSLNLSNNVLVGKIPSELHGLEKLQEFQVSSNQLNGSLPSWLGNLTNLRVLAAYENLLGGMIPDNLGLASELEILNLHSNQLEGPIPASIFTSGKLEVLVLTQNNLSGDLPQELGNCQGLSNIRIGNNHLVGAIPKTIGNISSLTYFEADNNNLSGEVVSEFSQCSNLTLLNLASNGFSGTIPPELGQLMNLQELILSGNSLFGNIPESILRCRNLNKLDISNNRFNGTLPTDICKLSRLQFLLLGQNSIGGEIPHEIGNCAKLLELQMGGNYLTGIIPSEIGHIRNLQIALNLSFNHLHGSLPPELGRLDKLVSLDVSNNRLSGNIPAELKGMLSLIEVNFSNNLLSGPVPAFVPFQKSPNSSFVGNKGLCGEPLNSSCGDIYDDSNNYHHRVSYRIVLAVIGSGLAVFMSVTVVVLLFMIRERQEKAAKDAGMVDDETNNKPTIVAGSVFVENLRQAVDLDAVVKATLKDSNKLSSGTFSTVYKAVMPSGMVLSVRRLKSMDKTIIHHQNKMIRELERLSKLCHDNLVRPIGYVIYEDVALLLHHFLPNGTLAQFLHESSKQPEYQPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTSRPPVDEDFDEGIDLVKWVHSAPVRGETPEQILDSRLSTVSFSWRKEMLAALKVALLCTDTTPAKRPKMKKVVEMLQELRQD 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4648g00009 888 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 686 888 - -
Pral4648g00009 888 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Pral4648g00009 888 ProSiteProfiles Protein kinase domain profile. 607 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4648g00009 888 Gene3D Ribonuclease Inhibitor 279 524 IPR032675 -
Pral4648g00009 888 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Pral4648g00009 888 Gene3D Ribonuclease Inhibitor 26 174 IPR032675 -
Pral4648g00009 888 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 27 175 - -
Pral4648g00009 888 Pfam Protein tyrosine and serine/threonine kinase 610 882 IPR001245 GO:0004672|GO:0006468
Pral4648g00009 888 SUPERFAMILY L domain-like 196 512 - -
Pral4648g00009 888 SUPERFAMILY L domain-like 42 296 - -
Pral4648g00009 888 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 280 886 - -
Pral4648g00009 888 Pfam Leucine Rich Repeat 328 349 IPR001611 GO:0005515
Pral4648g00009 888 CDD STKc_IRAK 613 885 - -
Pral4648g00009 888 SUPERFAMILY Protein kinase-like (PK-like) 607 885 IPR011009 -
Pral4648g00009 888 Pfam Leucine rich repeat N-terminal domain 31 61 IPR013210 -
Pral4648g00009 888 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 520 - -
Pral4648g00009 888 Gene3D Ribonuclease Inhibitor 175 274 IPR032675 -
Pral4648g00009 888 Gene3D Phosphorylase Kinase; domain 1 571 685 - -
Pral4648g00009 888 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 577 685 - -
Pral4648g00009 888 Gene3D Transferase(Phosphotransferase) domain 1 686 888 - -
Pral4648g00009 888 SMART LRR_typ_2 110 134 IPR003591 -
Pral4648g00009 888 SMART LRR_typ_2 374 398 IPR003591 -
Pral4648g00009 888 SMART LRR_typ_2 207 230 IPR003591 -
Pral4648g00009 888 SMART LRR_typ_2 447 470 IPR003591 -
Pral4648g00009 888 SMART LRR_typ_2 326 350 IPR003591 -
Pral4648g00009 888 SMART LRR_typ_2 86 109 IPR003591 -
Pral4648g00009 888 SMART LRR_typ_2 158 182 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4648g00009 Pral-Chr4648 36539 40762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4648g00009 9 887 Receptor kinase-like Gene Family AT2G41820 73.129 0.0 1294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4648g00009 PK_Tyr_Ser-Thr 9.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4648g00009 - - adu:107492611 1474.91